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Clone Read LE_HBa0207D06_SP6_370318

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0207D06_SP6_370318
Primer
SP6
ID from Seq. Facility
LE_HBa_207_D06-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 1156 raw
Sequence
>LE_HBa0207D06_SP6_370318 (raw untrimmed)
TTGTGTGTTGGGCATATCGTGGTGATTATATATCCGGATTAAGTGGAATGCCCCCTCTTTTAAAGGGGGGGTCTGCCGTATTTTAGGGGGTGAGTTTGAT
ATGTGATCCCCTTCTTTGTGAGGGGGGCCCTCCCCCTTTTAGAGGAGGGATAATCTATCTATCTTTTAATTGCAGTTCTACTTAAGGAAGAATTTCATAG
CGACGGTTCTCACTTTGGGGGGTTACCTGGCGAGTTAGGTCTAGGCACTTACGTACGTACATAATCGTGTCCTATGTCTGTTTATTAGTACACGCGGGAT
TCAATCAATTCGTCAGATACTACGGTCTGCTCTACAGAAGTTCTAATAATCTGTTATGTCTGGCTATACTTTAATATGACAATTTTGTGCCTAATAATCC
TCTGAAAGTGTAATGTGATAGCTATAAGAAGACGCCCCACAAGCAGCAATCAACATCATTAATACTAGTAATTTGAGGGATACATTATCATGATCATCAC
AATCTGAGCATGATATGTATATTATGGTAGAGATCTGACGTTAAGCTAGCTATCTACTGTTTATTGCTTATAAATATGCTCTTTGTAATAGATATACTTC
TCGTTGCAGGCGTTAGCCCACGTACATCACAATCTGGATCAATGTTATCGTATGTTGCACCCGCCCCCCCCCCATATATGGTGAGTAGGTATTGTCATTC
GTGTACTCTGTGACATACAGGAGATATATAGATCAGATCTGCACGAAACGTCTCACTTTCTAGAGTACGTGTAGAATGAAAGATCTAACACTGTCACGCG
CTATACCGACTCCTCGATAAAACTCCTATTCTGTCTAGTCCAATTGTGGATGCCTGTTTAGACTATTTGTCCCAATAGTATTCCTATGTTTGTGAGGTAA
TTTATGCGATTTCTGGCGATGGCGACTACCGCATAGACACGCACGCATGTCTATCTGAGAGGTTATATTGTCTCTAGCAGCAACTAGATTGCATGGTCTC
TATCGTCCCATAGACTACTGTATGGTGGAAGGATCTCATGTCTAATACTCTGGTCACAGTGGTGGTGGATCGAGCTCGCGGTAGAATCTAATTTGACACA
CACTCAGTGACTTCTGGTGAGTGTGACGGTTCTAATTGATGTCTCAGTAATATTAC
>LE_HBa0207D06_SP6_370318 (trimmed for quality and cloning vector)
CCCCCC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.807913
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0207D06
Clone
Clone name
hba-207d6
LE_HBa0207D06
P207D06
Clone type
BAC
Contamination
none
Estimated length
111,069
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found