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Clone Read LE_HBa0207D06_T7_370319

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0207D06_T7_370319
Primer
T7
ID from Seq. Facility
LE_HBa_207_D06-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 1708 raw
Sequence
>LE_HBa0207D06_T7_370319 (raw untrimmed)
ACAACAACACACCCACGACAACAGAACAACCCCAACACACACCCCATCACAACACACGAATCACCAAAAAAAACACAACAACCCCCACAGATCACTCCAC
AGCGCAAGNNANANNNNGAAACAAACACAACCACACCACACAAACAAAACAACACNAAGACACACCACACCCACTCCTCCCACCANCACAGACAAAACAN
CACACCCCACAAAAAACAAGGAAGAAAGCCAAACCACAACACATCACACATCACCACCTACCACCACGCACCAAACCAACACCCAACACCACCACAACCA
ACTCAACAAAGAACACACACGCAATCACCAACACACACCCACAACCTACCACCCACTACCAAACATACACACCCACACCCAAAAGCAACCCACACACCGC
CACCGACACCCCACACACAGACCACCCCAAACCACACAACACACAAATCACAACGCACCCCAACCAACCAACAACCAGAACAAGCCAAACAAACCACACG
AGCCCCACAAACAACCACCCAACCACCACACCACCACACCAACACCCCCAACAACCAACAAAAGAAACACACACCCACCTAGAACAACCTCACACCACAA
CACCCCAACTAACCTCCACCCACCAACCACCCACCCACACCAACGACAAAAGCCCAAACACACCCACCAACGAACGCCACACACCCCCACCACCCCCAAC
ACCTACCCACACCCACAACCCACACACAACACAACTACAAACACACAGAAACCATACCACACAACACCAACGCACAAAAACCACCCAACACAACCACACA
CCAACAACCACCAAACACACAAAAAAACACCCAGCAAAACACCCACCACAAACACAACAAACCACCCCCACACCCACCAACAACACCCAACCCGCGACCA
CACACACAACCCCGCAGCCAAAACCACCACCACAAACCCAACACACCACAAACAACACGACACAAACACACCCAACACGCCCACACAACCCACACCACAC
ACCAACCCACGACCTCAACATACCACACCACCAACAACACAAACACCCAACACGCAAACCCACCCCACCCACCCACAACACACACAAAAACCACCAGCAC
AACCACCCAACACAACCCACCCAAACCACCAAATACCCACGAAACAATACACAGCAACCCACAACCCACCACACACACCAACACAACAGCCAACACCACA
ACACCCACAAAACACACACCCACCACAAACACACAACAAAACCAAAAGACACACACAAACCCACAACACCCCACAACACCACCACCCCCACAAAACAAAA
ACCACAACATCGACACAACCCAACACACCACACAACCACCCACCCACAAACTCAGCCACAACAAACCCACCCCACCACCACAACACACACCACCAATGAG
CCAACAACAAACCGCACAAAACAAACACACAACTACAAAGCACACCACCACCACCAACAGCGACACCCCACCACCCGCTACCAACTACAAACAACACCCA
CCCACACCCCACAACTCCACCACCACAACCCCACAAACTAGCACAAACACCCACACAACACCAACGCACTATCACCACACCCAGACACACTACCACACCA
ACAAACACACATCCGCCACGCACACCAACCACACGACACCACACAACCACCCACCAACCCACACCCAACACAACCCCACCAACACAACAACCAACCCACC
ACATCACA
>LE_HBa0207D06_T7_370319 (trimmed for quality and cloning vector)
ACAAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for contaminants
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.34431
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0207D06
Clone
Clone name
hba-207d6
LE_HBa0207D06
P207D06
Clone type
BAC
Contamination
none
Estimated length
111,069
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found