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Clone Read LE_HBa0211D01_T7_372613

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0211D01_T7_372613
Primer
T7
ID from Seq. Facility
LE_HBa_211_D01-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
22 trimmed for vector and quality, 891 raw
Sequence
>LE_HBa0211D01_T7_372613 (raw untrimmed)
NNTTGTCGGCCGGGGATCTCTGAGTGACCTGCAGGCATGCAGCTTGGGGGAAACGACGTATGTGCCATTTTAGAGGATCTATGAAATCGTCTTAAGACAG
AAGATTCCCCTCAGCGAACCCAGATGCTAAATTTTATGTAGATAAGACAGATCCTGCTTTTTTCGTTTAAAGACAGCACTTCACCACTGAATGAGTCTAC
ATATGACTCATTTTTTGTTTTTCTGTCTTCTCCGTAAGTTGTAGATGTGCATAGATGTGTACAGAGCGGCAGTGTCCTCTGGTTAGCTGAGAAACTTTCT
CCATTGCTAGGACTTGGAAGACCGAGCCTAGACTATTCCATTCGGGTGCTTCCATCCCCCTTCTTAAGTCCTAACTGGGTTCTGGTATGTGTGGGGAGGG
GGGCCTTGACTAAATACCCCCATCCTTTGACATACTTCAAGTCGGCACCCCTTCCGTGCCATTCCTCATATGCCATAATACAGCATTCCGATCAAACAAG
ATTGCTGTCTTGCCAAGCCCACAGCTTTTTAGTGGACCCTTGTGCCGTACGGATAGCTCCCCCGCAGGAGTCTTGTGTAACCCGGACCTTAGAAATAATG
CCTCCCTCAGTTCTGTAACCGGTCGATTACTCGTTACATCGAGGTGAACATGGCGCCAGCCCCATCCAATTACGCTTGCGCACACAGGGGCGCCTACGAG
ATTATGCCCACCCTACGTAGCACCTCCCCTACTTCCCCACATTATCCTCTGCCCCTCTCCCCAGAAATAACACCTACCTTCCTCCCCTCCGGAGAGGGCG
CTCTCGTCACCTCTCAAATGGAGGGGGAAAACCCGGGCTGACGGGATTCGAAATCCTTTTCTACCAATTCCCATACTGCCCTACCCAGTTT
>LE_HBa0211D01_T7_372613 (trimmed for quality and cloning vector)
TTAAGTCCTAACTGGGTTCTGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.552868
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0211D01
Clone
Clone name
hba-211d1
LE_HBa0211D01
P211D01
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found