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Clone Read LE_HBa0113D16_T7_37423

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0113D16_T7_37423
Primer
T7
ID from Seq. Facility
LE_HBa_113_D16-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
520 trimmed for vector and quality, 816 raw
Sequence
>LE_HBa0113D16_T7_37423 (raw untrimmed)
ACTCGGTCCCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTCTAGAAAGAGAAATATTGGCCCGTGATACTTGTTCTTCTTTTGTAAATTT
GAGAGAATGATTTCAATTGATTAAATTTTATGGTTAAAATGTTGATATATGGGTTTTGGTGAAGGGTAAAATGACATAATATCACGACAAAATAGTTAAG
AAACCACTCCAAAGCCCCTAAAAAGTAACTCTCACACCTACTCCACCGTGGGCACCTACAGTCTATGGGTCCACCCACGAGACTATCACGTCTCTTCATC
GATTGGTACAAGACCGAACGTTATTTAGTGCCTCAAATGACACGCGCTACTCACAGGACCTGCTCCAATTCCACAATCCTCCGTCCCAACCGTGTACCTC
AACTTACCCCCTCCTAACCTCTCGAAAGAATCCGACTCACCCCCAACACTCCCATAGACCCCATGCACCGTACAACTCGCCTTGATCGCGACCTATATAA
ACATACAATCCACATTACTCTTTTATCAAAACCACCTATCCAACCACGACCACCCCCTACAACCCACTCTGCCCTCCCTATGGATCCTCGTTGTCGACTC
ACCTTGACCATACCAACTTATAAAAACATAAACAGCCCCACCCCTTACCACCCCAGGCACTCACCTATCTGGACAATATATACACAAACCTCTCATATTC
ATTATTGGTTACACTCCTTTCTCTCTTCCACTTTTGCCCATCTCACTTTCTCCTCTCCAAAAATCTCTTAACCATTTATCACTCTTAACACAATACTCTT
TCCTAATCGCTCCAGA
>LE_HBa0113D16_T7_37423 (trimmed for quality and cloning vector)
AGCTTTCTAGAAAGAGAAATATTGGCCCGTGATACTTGTTCTTCTTTTGTAAATTTGAGAGAATGATTTCAATTGATTAAATTTTATGGTTAAAATGTTG
ATATATGGGTTTTGGTGAAGGGTAAAATGACATAATATCACGACAAAATAGTTAAGAAACCACTCCAAAGCCCCTAAAAAGTAACTCTCACACCTACTCC
ACCGTGGGCACCTACAGTCTATGGGTCCACCCACGAGACTATCACGTCTCTTCATCGATTGGTACAAGACCGAACGTTATTTAGTGCCTCAAATGACACG
CGCTACTCACAGGACCTGCTCCAATTCCACAATCCTCCGTCCCAACCGTGTACCTCAACTTACCCCCTCCTAACCTCTCGAAAGAATCCGACTCACCCCC
AACACTCCCATAGACCCCATGCACCGTACAACTCGCCTTGATCGCGACCTATATAAACATACAATCCACATTACTCTTTTATCAAAACCACCTATCCAAC
CACGACCACCCCCTACAACC

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.962554
Expected error %
5.14681
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0113D16
Clone
Clone name
hba-113d16
LE_HBa0113D16
C03HBa0113D16
P113D16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found