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Clone Read LE_HBa0229A18_SP6_388563

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0229A18_SP6_388563
Primer
SP6
ID from Seq. Facility
LE_HBa_229_A18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
362 trimmed for vector and quality, 964 raw
Sequence
>LE_HBa0229A18_SP6_388563 (raw untrimmed)
GGGGNAGCAGTGAGNATNTCAGCATGTGCATCNATGATCTAGTGTTGCATTTCTGGATATTTGGAAGCATACTCACTATAAAGACTATGCAACTTACTGT
AACATTTTTGAATCTTATACTAAATTGTTCTTTGATTGGATGGAGTTGAAATATGTGTAGAATTCATGAATATAAACATGATAATGATTGTTTATAGGAC
TTTTTCTATTTTTATTGAAGAATGAAAATCTTATGAAATGATGAGGCGTAAAATTATGTCTAAACTTCTTAATGTCTTATTAACGTTCTTGTTGTTTTCC
TCAAATGATGTATGACTTAGCGTCTGTTGTATTGTAGAAAGACATTATAAGAATTGAATAATATGATCAAAATTTATTGTTGAAAACGATTTGCCTAAAA
ATATATTGATTAGAATTACTTAGTGTTTCTAAATTGAATTAATTAAAATTCCCTATAAAGTAGTAATCACTTCAAGTGATGAAAATGAAGGTTGAGTAGT
TAATATCCTCTATAGGTTGGGTTAAGTTGCTCCTATCTGGGTTTACCCTAAGTAGGGGATGGTGTTTGAGTATTGAGGTTTTACAAATTTTCTACGCAGT
GCTTCTATTCTTACTTGAATTGTAAAATAACGAACTCTTAATTATCTTGTTCATAAATATAGTCTTGCGTAATGTGTGAATTGCATGACCTATATATGAA
TTGGGATCAACTCCTTAACATCGCTGTGGGAAAATGGTGAATTTTTCGAAGAGCCCCAAATTACATACTTATTTTCACGACATGTTTTCTCCTGGTCAAA
TCCATTTAGCTATACAAATTCCAAATTTCACTTAATTGAGAAAATACACGCACCTCTTGATTAATCACTTTGTAAGGTGAATCTTTTGGCTTCAAATTAA
CAAAAAAGGTTTATCCCCGGAATATTAAATAAGTTTGAGCCCACCTAAACTAAAAAAATTTCAT
>LE_HBa0229A18_SP6_388563 (trimmed for quality and cloning vector)
TGTTGCATTTCTGGATATTTGGAAGCATACTCACTATAAAGACTATGCAACTTACTGTAACATTTTTGAATCTTATACTAAATTGTTCTTTGATTGGATG
GAGTTGAAATATGTGTAGAATTCATGAATATAAACATGATAATGATTGTTTATAGGACTTTTTCTATTTTTATTGAAGAATGAAAATCTTATGAAATGAT
GAGGCGTAAAATTATGTCTAAACTTCTTAATGTCTTATTAACGTTCTTGTTGTTTTCCTCAAATGATGTATGACTTAGCGTCTGTTGTATTGTAGAAAGA
CATTATAAGAATTGAATAATATGATCAAAATTTATTGTTGAAAACGATTTGCCTAAAAATAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.888143
Expected error %
1.56614
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0229A18
Clone
Clone name
hba-229a18
LE_HBa0229A18
C08HBa0229A18
P229A18
Clone type
BAC
Contamination
none
Estimated length
81,449
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found