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Clone Read LE_HBa0229F06_SP6_389001

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0229F06_SP6_389001
Primer
SP6
ID from Seq. Facility
LE_HBa_229_F06-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
159 trimmed for vector and quality, 1020 raw
Sequence
>LE_HBa0229F06_SP6_389001 (raw untrimmed)
NNNGGCAGCATTANCNTTNANTGTGAAGTTTGGGTATTCAGAGTTGGTCTAGTCGATGGTGAGGCTGTCCATTAAAAATCCTTCAGCAAACCTTCTGTGA
TAACCCGCTAGACCTCGCAAATGTCTGATATCTGTAGCAGAGGTAGGTCTGGTCCGTTGATTCACTAAATTTGTTTCCTGAGACTCCACTCGGATCCCTT
TGCGAGATACAATATGACCGAGAGAGGAAACAGATTGCCACCAGAATTCTTATTTGGAAAACTTAGCAAATGACTGGAGATCCTTGAGAGTCTTTCAAAC
AGTTCTAAAATGAGAGACGTGTTCCTCATTCCTTGAGTAATTGAGGATATTATCAACGAAAACGATAATGAACAAGTCCGAGTAATGTTTGAATACTCTG
GTCATCAAATCGATGAATGTTTCATGAGCATTGTTTAGTCTAAACAAGATGAATGACCATACCGAGTTCTAAGAGGGTGTTTTCTGAGTGTCTCTATCTC
TAACTCTAAGATGATAATGACCCGATCTGATGTGTATCGTTGAAAATTGTCTAACACCCTAAATTTGGTCGACGAGTCATCAATCCTGGGATGGGATAAG
TATTCTTGATTGTGACCTGGTTCTATTTACTATAGGCTATGCCAATTTTAAGAGACCCATCCTTCTGGCTTACTAACTACATTGGTGCGTCCCATAGTCC
AATATTACGTTAGAATGAATCCCTCATCTAAAAGGTATTTCCACTGCTCTTTTTGAGTCCTTTAGTTTTGCCTTAACCTATTTCTTTAAGAAGAAATAAA
AATAAGTCTACTTCTCTCGAAAGGTCTACATATCCGAAAGGCACATTCTCTTTTGGAGGAAGGAGTCTTAAGATAAAACTTTCTTGAAATAACCTTCCTT
AACCTCTGTACATTTTTCAGTACTTTGATTCCACTCTTTTCGGGTTTTCAAATCTTTAACCCGTCATTCTCTACTTATTAAAATCAAGCATAATTCCCTG
ATAATATCCACTCTTGTTGG
>LE_HBa0229F06_SP6_389001 (trimmed for quality and cloning vector)
TTCTAAAATGAGAGACGTGTTCCTCATTCCTTGAGTAATTGAGGATATTATCAACGAAAACGATAATGAACAAGTCCGAGTAATGTTTGAATACTCTGGT
CATCAAATCGATGAATGTTTCATGAGCATTGTTTAGTCTAAACAAGATGAATGACCATA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.91816
Expected error %
1.85311
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0229F06
Clone
Clone name
hba-229f6
LE_HBa0229F06
P229F06
Clone type
BAC
Contamination
none
Estimated length
104,559
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found