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Clone Read LE_HBa0217A14_SP6_392562

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0217A14_SP6_392562
Primer
SP6
ID from Seq. Facility
LE_HBa_217_A14-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 994 raw
Sequence
>LE_HBa0217A14_SP6_392562 (raw untrimmed)
NCCGATCCATTTGGATGATTTTATATGAACCTTGTTTATGGTGATCACCATTCCTGCTATAGACCGAACTTTTATAGGACTATAGCTGATGTGTGCGCAA
CTATGCCCAATTCTAATGTGGAGGGTTGATGAACATCTCATTTACCATGGACAAGAATCGTTACTCGGGTACCGGACAATCAATTATAACGATTCTGGAT
TTCCCTTAAACTAAATAAGGACTGATTTTTGACACTTTAGAATATTAGCTTAATACAACGTGGTTAAGCCGCGACAATTTTATCATTTTGATATGAGAGG
GGTTGAAAATCCCTCAGATGACGCTGATACCTTTTTTCACCTTAATAATTGATACCCCTTTAACTTTTTTCCCCCAGAATATGTTGATGTCTTCCACAAC
AACATGGACCCATATAAAATGTTATGTATCAGAAATCCAGCTGCAGGGAATATTCCATACATTATCCTTAAGTCAGATCAGAATACTTATTGCAACTTCT
TCTATTGACGATAACTGATTACCTATGGTCACCAGAAAAAATTATTGTTACCCTTAAACAATTTTATCAACTTTAAATTCCAATCATGCATCTGGGTTGC
TAACGTAAGCTTTGGCGACTGGTCACTCTAACCTAATCTTTAATAACCTCATAAACTCTATCTTGCATGAAGGTACTCTCCTTAATAATGTGCTCTATTA
AGCGTAATAAATCGTTGGTAAATTTATGGTCCTCCCAATCATTTTGCTGGCTAAATTAATTGCATTGTGTACCAAATGGCTAAATCTTCCCCAACTGTGA
GTGTTTCCCCTTGCGTTATACTAATTATCTTCCTTCATTTATTTTTTTTTGCTCCTGTATAAAATTCAAAACTGGTTTTGATTTTTTCATTTTCCCTATT
TTTCACTTCTCAAGATATGCTTTCTTATTAAATAATAATTCCTATACCTCTCTTTATTGGGTACTCCCTTTTCTAAAATCTCATCTTCCCAAAA
>LE_HBa0217A14_SP6_392562 (trimmed for quality and cloning vector)
CAAC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.651054
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0217A14
Clone
Clone name
hba-217a14
LE_HBa0217A14
P217A14
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found