Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0217A14_T7_392564

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0217A14_T7_392564
Primer
T7
ID from Seq. Facility
LE_HBa_217_A14-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
9 trimmed for vector and quality, 943 raw
Sequence
>LE_HBa0217A14_T7_392564 (raw untrimmed)
NNAATACCGTCGGGGATCTCTGAGTCACCTCGCAGCATGCAAGCTTGTGGAGCCACAATTTCTTGATTTACACGTAATTACAGAATAAATCTGTCCATAA
CAAAAAAGAAAAACATTTCAAATACACTGGCATACTCCATATTTAAATTTTTATGGATTTGACATTAGATTAGTATCATTTAAATACTATGTCTCAAATT
TAATATTTTTCCCAGTTTAATAAATTTATAAAGATTTGTTACTCATGTCCTTTCACTGACGCTTGACAACGATAAAAATCATTGCGAGGATAGTTACATT
GATGAAACAGGTCATCAAATTATGCGAACTTGTCGTATTTCACAAATGAATGTTATGAATATGTAATAGACAAGTAAGGTTTAAGTCACATCGACAACGA
GTTTAATTTGAACAAGTTACGGTAAACGAATTAACAAAAATTCTTATCGAATTTTGATTCAGTTACATGTTTGCTTAAACTTCATTTAGATTATTCAACA
CAAGTGATAAATCGAAGAGATCTGACTAATTAAATAGATGTATCAGTTTCAAAAACCAATAGTGGATTTATCGATGATAGAATAGATCTAACTCCGCCAG
TTCCGGTGGGTTAACAAAAGTCCGAGATATTTAGTACAGTTGACTAGTTAATTGTTTATCACCTGTAGAAAATACAAAGAACTACTTCCCTGGAAATTGC
AACTAAAGTCCAAGAAACTAAAAAGTTGATGACCCGTATTTTAACCCGTTGCAACCCAACGACTTGGTGTTGTTACCATCCAACAAAATACTCTAGCTAA
TTACATTGATAATTGTTCCCGACCCAAACTTATTACGCCAGGATAATTCCTTGACAAATTCCAGCACCGGTAAAGTTTTTGCCATTCCCCTAACATTTTT
CCCAACTATCCCAGGAAACCCCTCACCAAAAAAAAGGTTTTTA
>LE_HBa0217A14_T7_392564 (trimmed for quality and cloning vector)
TTTAAATTT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
 Warnings:
  • Not screened for contaminants
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.521217
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0217A14
Clone
Clone name
hba-217a14
LE_HBa0217A14
P217A14
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found