Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0059P18_T7_47219

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0059P18_T7_47219
Primer
T7
ID from Seq. Facility
LE_HBa_059_P18-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
795 trimmed for vector and quality, 923 raw
Sequence
>LE_HBa0059P18_T7_47219 (raw untrimmed)
TTAGCCTTGTTACCCGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGATGTTAAATTTTGAAGTTAAAAATTTAAATTTTTGAAATTGTGATA
TTTTAGAATCTATTTGAAGCTTTTTAAATATTTTTTTGAGTGCAAATTTTGAAAATTGATTTTAGCTTATTTTTGAAAACTTAAAAGTAATTGAATATTA
AATTTGCATGGCCAAGTAAATGTTAAAAAATAAATTTAATGACTTAATTATGCAAATCAGCAAGTTAATTAATACTCTCTTTGTCCATTTTAATTTTTAA
TTATTCTTTTAGCTCAAAAATTTTACTCTTTTCGTCCGATATTGTTTGTCATAATTTCTATTTTTAGAGTTAAACTATATAAATTTTGACTAGTATTTTA
AGATATATTTTTTCATCATATTAATATTCAAAAAATTACAATTTATAGTATTTTTCATATATTTTTAGAATATCTAAAATTTTTGTTTAAAATATCAAAT
TAATGTGATCTAATTTAACTTTGAAAATTAATCAAATTAACTTTTAAAAAATATAACATAACAAAAAAAATTCCAAACGGAGAGAGTATTCATTTGATTA
GAAATTAATTTCTATGCACTGAAATGTATATTATTATTATTTTTACACCGCCAATCAAGATGAACTATAAGTGAGATATAACTTTTAATTGTGTATCTAA
TTGAGTACTAATATTTACGGAAAGTAAAGTAAATGATATGTGAAATTTCGTTACTTTCTCCGTCTCATATTTTTTATACGTTTATTAAAAAATCATAAAT
AAGAAAATCATTTTATTTGATCACTTCTTAAAAAATTTCTTGATTATTTTATAAATAATATGAACACTTTATAAGAAATTATTTACAAAATAACATAGGA
ATAATCAATTATGATATCTCATT
>LE_HBa0059P18_T7_47219 (trimmed for quality and cloning vector)
AGCTTGATGTTAAATTTTGAAGTTAAAAATTTAAATTTTTGAAATTGTGATATTTTAGAATCTATTTGAAGCTTTTTAAATATTTTTTTGAGTGCAAATT
TTGAAAATTGATTTTAGCTTATTTTTGAAAACTTAAAAGTAATTGAATATTAAATTTGCATGGCCAAGTAAATGTTAAAAAATAAATTTAATGACTTAAT
TATGCAAATCAGCAAGTTAATTAATACTCTCTTTGTCCATTTTAATTTTTAATTATTCTTTTAGCTCAAAAATTTTACTCTTTTCGTCCGATATTGTTTG
TCATAATTTCTATTTTTAGAGTTAAACTATATAAATTTTGACTAGTATTTTAAGATATATTTTTTCATCATATTAATATTCAAAAAATTACAATTTATAG
TATTTTTCATATATTTTTAGAATATCTAAAATTTTTGTTTAAAATATCAAATTAATGTGATCTAATTTAACTTTGAAAATTAATCAAATTAACTTTTAAA
AAATATAACATAACAAAAAAAATTCCAAACGGAGAGAGTATTCATTTGATTAGAAATTAATTTCTATGCACTGAAATGTATATTATTATTATTTTTACAC
CGCCAATCAAGATGAACTATAAGTGAGATATAACTTTTAATTGTGTATCTAATTGAGTACTAATATTTACGGAAAGTAAAGTAAATGATATGTGAAATTT
CGTTACTTTCTCCGTCTCATATTTTTTATACGTTTATTAAAAAATCATAAATAAGAAAATCATTTTATTTGATCACTTCTTAAAAAATTTCTTGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.844869
Expected error %
0.28125
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0059P18
Clone
Clone name
hba-59p18
LE_HBa0059P18
C07HBa0059P18
P059P18
Clone type
BAC
Contamination
none
Estimated length
95,472
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found