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Clone Read LE_HBa0066J22_SP6_50778

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0066J22_SP6_50778
Primer
SP6
ID from Seq. Facility
LE_HBa_066_J22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
789 trimmed for vector and quality, 854 raw
Sequence
>LE_HBa0066J22_SP6_50778 (raw untrimmed)
GGCCCAGCATTTTATCAGTGGGAGTGGATCTTGTCGGCTTCTTATGATTTGTGCATGTGAATTGAGTAAAAAATGTTAATTAAACAAGTTAAAATGAGAC
AAGTTTATAAATAGATGAATTATTAATTCATTAGAAATTGCTCGGACCAGATGAGTTAGGTCAAGATACATTGAACAATAAGTCATAATTATAACCTAAT
TTTTGTCAACTCTTACCAAATTGTAATAATCTTTCTATTATTCATATAGAACCAAAAAGTAATTAACAATTTTGACTGATACTATAAATTTGAATATATA
AATCACGAGAGTGAGAAAAATAAATTTGTTGGTACAACTTTTGATAATGTTTAGGCAAATGAGGCATGTTGAGATCTCATGCAGTATCTATATTTGAAGT
TGGTATCTTGGAGAAGGGTCAATTGCCTACTTTGGGCAATGGGCAAAATACTTATCATATTTTATATTTTTCATACAAAAATTTCATTTTCATTCTACCC
TACAACATTAATTGTACTTTTGTCTCCATGGTGAAGTAAGTATTTTATTTGTTGTCTCTGCGCTTTTAAGAATTTATGTCTAGCTAGATATAATTTAGTT
TTGTGAAGCATTAAAATTAAAGATCAGTCAACTTGAAAGATAAAATCGTATATATTTGTATGATTATTCTTAATGGAATTAAAATTTAAATACCAGTCTT
TCAAATGAAAATTCCAATAGCTTAACTTAAATAAAACATTTTATATCTTTTTGGCTAATAATTGAATATTTTGACTTTTTTTTTTCAACCTTTCATTTTT
AAGCAATAATTTATCTTCTTCTTGATTTATAAAGTTTGTGCAGAACATTTGCAT
>LE_HBa0066J22_SP6_50778 (trimmed for quality and cloning vector)
CTTGTCGGCTTCTTATGATTTGTGCATGTGAATTGAGTAAAAAATGTTAATTAAACAAGTTAAAATGAGACAAGTTTATAAATAGATGAATTATTAATTC
ATTAGAAATTGCTCGGACCAGATGAGTTAGGTCAAGATACATTGAACAATAAGTCATAATTATAACCTAATTTTTGTCAACTCTTACCAAATTGTAATAA
TCTTTCTATTATTCATATAGAACCAAAAAGTAATTAACAATTTTGACTGATACTATAAATTTGAATATATAAATCACGAGAGTGAGAAAAATAAATTTGT
TGGTACAACTTTTGATAATGTTTAGGCAAATGAGGCATGTTGAGATCTCATGCAGTATCTATATTTGAAGTTGGTATCTTGGAGAAGGGTCAATTGCCTA
CTTTGGGCAATGGGCAAAATACTTATCATATTTTATATTTTTCATACAAAAATTTCATTTTCATTCTACCCTACAACATTAATTGTACTTTTGTCTCCAT
GGTGAAGTAAGTATTTTATTTGTTGTCTCTGCGCTTTTAAGAATTTATGTCTAGCTAGATATAATTTAGTTTTGTGAAGCATTAAAATTAAAGATCAGTC
AACTTGAAAGATAAAATCGTATATATTTGTATGATTATTCTTAATGGAATTAAAATTTAAATACCAGTCTTTCAAATGAAAATTCCAATAGCTTAACTTA
AATAAAACATTTTATATCTTTTTGGCTAATAATTGAATATTTTGACTTTTTTTTTTCAACCTTTCATTTTTAAGCAATAATTTATCTTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.899076
Expected error %
0.0964506
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0066J22
Clone
Clone name
hba-66j22
LE_HBa0066J22
P066J22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found