Clone Read LE_HBa0083F17_SP6_52112

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0083F17_SP6_52112
Primer
SP6
ID from Seq. Facility
LE_HBa_083_F17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
712 trimmed for vector and quality, 848 raw
Sequence
>LE_HBa0083F17_SP6_52112 (raw untrimmed)
AAATGGGTTCCNTAACTATTCGAAGAGGACTTTCTCAAGGTTTCAACCCTAATTTCGTGCCTAGGTCTTCAATAAGGCACCGAAGTTCTCAATTCAAGGT
TAGCTATCACCTTAGAGCCAACTTCAAAATGATTTCAAAGTGTTCAAAGTTTATGGTTAGTCCAATTTTCACTCTAACTCAAGGATTCTTGCATGAAACA
GTTTCAAATCATTCGATACGATAGTATTGATGTTAGATTGATGTTTCTCAATGAAAAAATCCATGAACCCTTAATCTTTTTAAATCCATAATTTTGGCTT
ATGAAGTGGGTTTATTGCTTATGATCTAATCTAATGTTGATATATTTGGGTTTAGTTCATGTTGTATTGTTGATTTCTATTACCTATGTTATTATATTAT
GAATTGTTGGAGATGTTAAGGAATGGTGATCTTGGCTACTGGAAGAGGTTAAGTTGACCTAATTCCCTTACTAATGTAGAATTGATATAGGATTGCTCTT
GTATGTTATGATCCACTTATGGTGACGGTGTTTACTTCTTTTTTATGATTGTGATCATGTCCTTGTCGGTATTATTATGTGAATTGTAGTAGTATCATGT
TATGGTATATGTGAAGGTATAATGTGAAGTTGGTTAAATGAAGTAATGTGACTATGTGCCAGGTGTTATAATGCATAAAGTGAAGTTACTATGTGATATT
TGGGTTATCTTGTGTAATACTCAAAATGTGAAGGCGTTCATGTGATCTCGAGGTGATCTTGTATAAAGCTATGTGATGATGTGAATGAAAGCATGTTCCT
CTAAATGTTGGTATGTAAGGATAATAGAGCCCTTTAAATGGTGAATTG
>LE_HBa0083F17_SP6_52112 (trimmed for quality and cloning vector)
AAGGTTTCAACCCTAATTTCGTGCCTAGGTCTTCAATAAGGCACCGAAGTTCTCAATTCAAGGTTAGCTATCACCTTAGAGCCAACTTCAAAATGATTTC
AAAGTGTTCAAAGTTTATGGTTAGTCCAATTTTCACTCTAACTCAAGGATTCTTGCATGAAACAGTTTCAAATCATTCGATACGATAGTATTGATGTTAG
ATTGATGTTTCTCAATGAAAAAATCCATGAACCCTTAATCTTTTTAAATCCATAATTTTGGCTTATGAAGTGGGTTTATTGCTTATGATCTAATCTAATG
TTGATATATTTGGGTTTAGTTCATGTTGTATTGTTGATTTCTATTACCTATGTTATTATATTATGAATTGTTGGAGATGTTAAGGAATGGTGATCTTGGC
TACTGGAAGAGGTTAAGTTGACCTAATTCCCTTACTAATGTAGAATTGATATAGGATTGCTCTTGTATGTTATGATCCACTTATGGTGACGGTGTTTACT
TCTTTTTTATGATTGTGATCATGTCCTTGTCGGTATTATTATGTGAATTGTAGTAGTATCATGTTATGGTATATGTGAAGGTATAATGTGAAGTTGGTTA
AATGAAGTAATGTGACTATGTGCCAGGTGTTATAATGCATAAAGTGAAGTTACTATGTGATATTTGGGTTATCTTGTGTAATACTCAAAATGTGAAGGCG
TTCATGTGATCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.935699
Expected error %
0.265927
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0083F17
Clone
Clone name
hba-83f17
LE_HBa0083F17
P083F17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found