Clone Read LE_HBa0002D20_SP6_52790

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0002D20_SP6_52790
Primer
SP6
ID from Seq. Facility
LE_HBa_002_D20-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
704 trimmed for vector and quality, 718 raw
Genbank Accession
DU078360
Sequence
>LE_HBa0002D20_SP6_52790 (raw untrimmed)
GGCTTATATCTCTTCTTCTTCTTTTTTTATGAATCAAGCACATGAAAACTTTTTTTTTGACAATCAAACATGTCATCTCTATTTATTTTGATACCACGTT
GATACGTTTGATCGTCGTCTCATATAAAAACTTAGCCTATTAGAAAAACATATTGTTATTATTTAATCATATCTTTTAACAATATATGATCATGATGTGA
TCAACAAAATTTAATATTACAATCTAGGCCCTTTACTTTAGACCTAGTAGACTTCACAATTTTATTTGGTTGATTATTACCATTATGGAGTTACAAAATG
TGTGTGCATACATAAATGTAGCACTATTATAGTACTAAAAACAAATAGCAAGAATATGTTTGCAAGAATGAAGTCATTATTGGGAAGGCAAATGTTTGAG
TTGGGACTAGAAAGCAAAGGGTAATATTTATTATTGTTATAATTATGTTAAAATATATTGAGGACTCCAAGATAATAAATGCTCAATGGGGAGGAGAATA
TATATATATGTATCCCTTCATTATTATAAGGTAACTTTTGTATATCAAAACTTAAGCATATATAAAAGAAATCATTTCTTGACTTTGCGAGATTTGCGAT
AAAATATATATTATAATGCTACATATTACTATATATGTTCAATATTTGCATTTTCCAGTTTGAGTATTTATTTGCATTGAATAGACCGTATTATGTCAAA
AACTAAATTCAGATTATT
>LE_HBa0002D20_SP6_52790 (trimmed for quality and cloning vector)
CTTCTTCTTTTTTTATGAATCAAGCACATGAAAACTTTTTTTTTGACAATCAAACATGTCATCTCTATTTATTTTGATACCACGTTGATACGTTTGATCG
TCGTCTCATATAAAAACTTAGCCTATTAGAAAAACATATTGTTATTATTTAATCATATCTTTTAACAATATATGATCATGATGTGATCAACAAAATTTAA
TATTACAATCTAGGCCCTTTACTTTAGACCTAGTAGACTTCACAATTTTATTTGGTTGATTATTACCATTATGGAGTTACAAAATGTGTGTGCATACATA
AATGTAGCACTATTATAGTACTAAAAACAAATAGCAAGAATATGTTTGCAAGAATGAAGTCATTATTGGGAAGGCAAATGTTTGAGTTGGGACTAGAAAG
CAAAGGGTAATATTTATTATTGTTATAATTATGTTAAAATATATTGAGGACTCCAAGATAATAAATGCTCAATGGGGAGGAGAATATATATATATGTATC
CCTTCATTATTATAAGGTAACTTTTGTATATCAAAACTTAAGCATATATAAAAGAAATCATTTCTTGACTTTGCGAGATTTGCGATAAAATATATATTAT
AATGCTACATATTACTATATATGTTCAATATTTGCATTTTCCAGTTTGAGTATTTATTTGCATTGAATAGACCGTATTATGTCAAAAACTAAATTCAGAT
TATT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.904994
Expected error %
0.0639985
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0002D20
Clone
Clone name
hba-2d20
LE_HBa0002D20
C07HBa0002D20
P002D20
Clone type
BAC
Contamination
none
Estimated length
118,109
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found