Clone Read LE_HBa0012C02_SP6_5858

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0012C02_SP6_5858
Primer
SP6
ID from Seq. Facility
LE_HBa_012_C02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
660 trimmed for vector and quality, 875 raw
Genbank Accession
Sequence
>LE_HBa0012C02_SP6_5858 (raw untrimmed)
AAAAGGCCTTACCGCAAGCTATGTAGNCGNNANNNNNNNNNNANNNNNANNNNNANGAAAANNGGNAAAGTTGCTTANGAGATTGACTTTCCGGATGATT
TGTCATTTATTCATTCAGTTTTCTATGTTCTCCTTTTGAAGAAATGTGTTGGAAATTCGACATCTATAGTCCCCTCAGAAGGTTTGGGAGTTAAGGAGAA
TCTTTATTATGAAGAAGTCCATGTGAGATTTTAGACCAGAAAGTCAAGAAGTAAAGAAACAAAAATGTTTCTTTTGTGAAGGTTCTTTTGAGGAATCAAT
TAGTTGAGGGTGCTTATTGTGAGTCTAGAGCTGATATAATGTCCCGTTATCATCATCTCTTTCCGTACGTTCCTACTGTAGCTTGAGGTATTTATTTACT
CATGGTTTAGTCTTTTGGTGTCATGTGCCTCAGATATTCCCATGATTTCCTCATATATGCATGATCTTGAAAAGCCTAAACTTTGAGATGGGTTAGTTGA
TTGATTTCTTCAAGTTTATGGGCATTTGAGTATGAGTAGCATATAGACTTCATGATACAATATTTTGAACATTATTTAGATAGAAACTAATGCGTTGTCA
CATCTAGAGAATACACCCCAGATGCGACCGGTGTCATTTTCCTCTCAAAGGACTCAGACAAGCCCTTAACATTCATCATAACATGTCATCAGTTAAAATT
GCACAAAATTGAAAACTCTTGCATATTATGTGAAGTTTACTTTGACTTCATACTTCAATCATGAAAACGTCATAGTCTAAAATCTATTTTCTATAAAAAC
CATCCTAAAGAGTATGAATCTGGGACTTAGCCAATAAAAAATCAATATTCCCATATAGAACCCTTAAAACAAAAA
>LE_HBa0012C02_SP6_5858 (trimmed for quality and cloning vector)
GATTTGTCATTTATTCATTCAGTTTTCTATGTTCTCCTTTTGAAGAAATGTGTTGGAAATTCGACATCTATAGTCCCCTCAGAAGGTTTGGGAGTTAAGG
AGAATCTTTATTATGAAGAAGTCCATGTGAGATTTTAGACCAGAAAGTCAAGAAGTAAAGAAACAAAAATGTTTCTTTTGTGAAGGTTCTTTTGAGGAAT
CAATTAGTTGAGGGTGCTTATTGTGAGTCTAGAGCTGATATAATGTCCCGTTATCATCATCTCTTTCCGTACGTTCCTACTGTAGCTTGAGGTATTTATT
TACTCATGGTTTAGTCTTTTGGTGTCATGTGCCTCAGATATTCCCATGATTTCCTCATATATGCATGATCTTGAAAAGCCTAAACTTTGAGATGGGTTAG
TTGATTGATTTCTTCAAGTTTATGGGCATTTGAGTATGAGTAGCATATAGACTTCATGATACAATATTTTGAACATTATTTAGATAGAAACTAATGCGTT
GTCACATCTAGAGAATACACCCCAGATGCGACCGGTGTCATTTTCCTCTCAAAGGACTCAGACAAGCCCTTAACATTCATCATAACATGTCATCAGTTAA
AATTGCACAAAATTGAAAACTCTTGCATATTATGTGAAGTTTACTTTGACTTCATACTTC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.952869
Expected error %
0.216847
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0012C02
Clone
Clone name
hba-12c2
LE_HBa0012C02
P012C02
Clone type
BAC
Contamination
none
Estimated length
92,195
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found