Clone Read LE_HBa0123P03_SP6_58708

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0123P03_SP6_58708
Primer
SP6
ID from Seq. Facility
LE_HBa_123_P03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
765 trimmed for vector and quality, 883 raw
Sequence
>LE_HBa0123P03_SP6_58708 (raw untrimmed)
CCAGGATTTTCCACAATAAGTTCCAATCTTGGGGGCTTTATGGTTTAGATTTATTGTTTTGTGTTTTTTCATTTACCTTTTGAAATGGGTTATGTGCTAG
CTAAAGTTCGAATTTACATGAGCCATGTAAAATTGTAAATATTCTTGACTAAAAATCATATAACTTATAAGTATTATTAATTAAGCAATATAATTTAAAT
AGTATTAAATTTATTAATAAAATTTCGATTTTTTCGTGCACCATAGTCTCATAATCCTTGCTCCAAACTCTGAATTTGAAGAATTGAGTTTTCGAATAAA
AACTGACATCGAATCGAAATACCGAAGAATTGGTGGGGATGGTCTATTAAAAGGGACAAAGAAGTTAGGCAATTAGGTGAGAGTCCTTCAAGTTTTAAAT
ATTGAGTAAAAGTGATAAATAAATAAATAGTATTAATTAAATTTAAAAAGTATTTTCTGAATAGCCCCAAACATTTAAGTTGAACACTTTGCCTCTATAT
TCTTTATTTCTTTACCTTTAAAATTTAAAATATTTAAAATTTTATCAAAATAGACAAAAAAAAATAGAAGATTCTTTCTCAACTTCATTCTCTTCCCGCT
GATCCTCTTCAACTGTAGCTATATTTGTCAATTTTTCTTTCTTTTTCTTCTTGTTCTTCATCTTCCTTTATTTGCAAAATTATGCTTTTATATAGAAGAT
CTATCAAGAAAAATTTATGAAAAAGGAATATCAAATATATATGTTTGAGTTTTTTTGCATTGTATTTGTTTTGTTTAAGCTTTGAATAAACTAAAAAGAG
TAATGTTGATAAGTATGAAAATCACTTTGGGTAATTCTTGAGTTGTATTTAATGAATCCTAAAGATTTTTTCGGGCACAACTT
>LE_HBa0123P03_SP6_58708 (trimmed for quality and cloning vector)
GGCTTTATGGTTTAGATTTATTGTTTTGTGTTTTTTCATTTACCTTTTGAAATGGGTTATGTGCTAGCTAAAGTTCGAATTTACATGAGCCATGTAAAAT
TGTAAATATTCTTGACTAAAAATCATATAACTTATAAGTATTATTAATTAAGCAATATAATTTAAATAGTATTAAATTTATTAATAAAATTTCGATTTTT
TCGTGCACCATAGTCTCATAATCCTTGCTCCAAACTCTGAATTTGAAGAATTGAGTTTTCGAATAAAAACTGACATCGAATCGAAATACCGAAGAATTGG
TGGGGATGGTCTATTAAAAGGGACAAAGAAGTTAGGCAATTAGGTGAGAGTCCTTCAAGTTTTAAATATTGAGTAAAAGTGATAAATAAATAAATAGTAT
TAATTAAATTTAAAAAGTATTTTCTGAATAGCCCCAAACATTTAAGTTGAACACTTTGCCTCTATATTCTTTATTTCTTTACCTTTAAAATTTAAAATAT
TTAAAATTTTATCAAAATAGACAAAAAAAAATAGAAGATTCTTTCTCAACTTCATTCTCTTCCCGCTGATCCTCTTCAACTGTAGCTATATTTGTCAATT
TTTCTTTCTTTTTCTTCTTGTTCTTCATCTTCCTTTATTTGCAAAATTATGCTTTTATATAGAAGATCTATCAAGAAAAATTTATGAAAAAGGAATATCA
AATATATATGTTTGAGTTTTTTTGCATTGTATTTGTTTTGTTTAAGCTTTGAATAAACTAAAAAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.898236
Expected error %
0.269071
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0123P03
Clone
Clone name
hba-123p3
LE_HBa0123P03
P123P03
Clone type
BAC
Contamination
none
Estimated length
71,329
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found