Clone Read LE_HBa0186H11_T7_66021

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0186H11_T7_66021
Primer
T7
ID from Seq. Facility
LE_HBa_186_H11-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 2079 raw
Sequence
>LE_HBa0186H11_T7_66021 (raw untrimmed)
AGTTTCACAGAACTCATTTGTCACTCCGCTAGGCACGACTTGAGCAGCATGAAGCTCCTTCTCGCACTCCGAGACAGCACACTNGACCTGCTGNATCTGA
GTAGCAGGACGCGGAGCTCNNTACAGATGGTGAGGTATATGTGTAAGTTAGAGCTCCGTCGCACTGGGCCCGCCCTCTNTCTATTANACATTCATGTGNG
CAGATTCGTGTTGTATGATAGATCTGTCTCGTGTAGAGTATAGACGGTCNGAGTGTATAGTGTGAGTCCTCTACTTATATAGTACTGATGTGACGCTGAC
AGTATTGANATCGTGGAGACTGACAGCTGTGCTGCATGTGAGAACTAGCGTTGCGTCGACACCACCGATACGCGACANTNACAGCGAGGTGTACGTAGAG
CCCGACAGGCTCTGCGCAAAGAACACACGCATNGGCTGTGCGAGTGCACGTCATAGACANTAGCGTATGACATNANGATNACGGCGCAGANCAGAGAAGA
TTAGCTTCATGACAGTNGCGANGAGACTCTACTGTGNCGCGANAGCGACAACGATCTNGTAAGTCANCANAGCATGCCAGTATATGCATCACGAGTTAGT
ANGACTATANANGCACGCGACAATNCGTCANGCTTACGCACACGATAATAGATGCTCTGCCGACTGCTGACGTACAGCTTACGACNCTGCTTGGTCACAT
NGTACGGTACACTGACGANGAGATACTATGCNACTCATGTCACAGACGAACTATGACGCGCTGCCCATNACCTAGGCACGAGATGCGCANCGAACGCGCN
CTGATACGCTACTGATNGCATAGCGCGCGAGNANGNAAACGTTGNCTGCTCGATAGACGTGCAGCGTAGACCGCAGTGAAGTTAGACGGTGCTCGCAGTG
TAGCACACGTAGNTAGAAGATGATACGATGACNTNTGAGTACAGTGTGCGTACTGCCGCGGCGTGCATAGACGCTGCTCTGACATCAGCTACTCGAGTAT
ACTGNTCCTACGCTNCACTGTCATGCACGCTNACGNGCTGCCTNCGTNGACNCAACACACGTCAGGCTATGNCGCGACCAGATGNGNCTGGTCGCTGACT
GTGTCNAGTCAGACGACACTAGCAGCGCTACACGCGCTCACTACAGTCTGTCGACAAGATGCACTAGAGGNCGAAAGAGACATCTATATAGCTCGTNTGC
GCNCAANAAATAGCANCTCGATGACGTGAAGCGACTGCGTCTGTGTACTGTCAGCGNGATGCGACTGGCTCATGATATGTGAGTGTATGTCTTCGNCTGT
GACTACTNCNTGTCGAGCTACATNCACTGTATACTCGTNTNNATGATGTCACGAGACNATCNCNCTNGCGTGACTATCGACGCGACTATACGACTAGTCT
GTATATGCTGTGNGACGATATGCAGCTATGACTATAGNANGANGTATCGTACATGAGCNAGTACAGCAGACGCGCATAACAGTNNGACGCAGAGAGACAC
TATACGCATAGCGTGTNGATAATACATAGAGCTATCACGAGTAGATGTGCTGAATGTNGACACAGAGATCATATGTGANAGCTACAGCGAGATNCGATAT
NCTATGTGACTGGCGTGAGCGCTGCGNCTAGTANCGCGGTAGTGCTGANTTAGTAGTATGGATAGTATATNGATCGGCACATTCCACCAGTCTATNGACG
ACATCACTACGACACAGACTGCNGAAGAGCGCATGCGCGCGTCTGACATACACAATGACGATGAATACGACGCTNGGAGCTGCGCGTGGATGATNGNACG
AGAGGAGTANCGATGCGTGACACGAGATGCAGGTACGTACGCGTGNANCATGATGACGCTGAAATATGATGCGCAGCGTGCGCGCGCTGACGTATGAGCT
CATCACGCACNGATNCGAGAGGCTCTACGAGTGACTGATGCNCGAGTANCGAGAGACTGNCGCGAGCAAGCTGCGAGTGATGTAGTGCGNGNACGANATN
ANTGGGAGTGTGTGACAGTATGTCGGTATNGTATGGCTGAGAGCATGTACGATAGGAGCAGCACACTGCTGTTCAGTGA
>LE_HBa0186H11_T7_66021 (trimmed for quality and cloning vector)
A

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • High predicted error rate
  • Low complexity
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0186H11
Clone
Clone name
hba-186h11
LE_HBa0186H11
C07HBa0186H11
P186H11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found