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Clone Read LE_HBa0033D19_SP6_6708

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0033D19_SP6_6708
Primer
SP6
ID from Seq. Facility
LE_HBa_033_D19-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
398 trimmed for vector and quality, 922 raw
Genbank Accession
Sequence
>LE_HBa0033D19_SP6_6708 (raw untrimmed)
GTTTAAAAGGAACTCCTGCCTAGATGCCATTTCCAGCATTTACAATTANTCTGCATTTTTCAACCTTCCATCACATAAATAAACATTTTCACTAACCGCA
AATAATGATTCAATCGTTTAAGCTAGCTCATAAGAGGAGGTTTGTCCAAGTCCATATAAAGACACCAAATTCTCGTCCTTCTATCAATGTGAGACATCAT
AACACCGCCTTATTAGGATCGAATCCACACACACACTTGATGAATGAAGAACATAACAACTTTCTAGAGAGAGATGAGAGATCTAGAAAGACAAAGAGAG
AAATCAATATTTCGTGGTAACACCCCGTAGGTTAACTTCCACGGTGCTGGGGTATATATTAATAATTCAGAGTATTTTTTGTTACAGAGAATAAATAGTA
TAGCCTAAAATTTAGGTCGGGGCGCNGCCNCNAACACCCCCNNCNGANGNNNNNNNCNNNNCNNCNCNCNCCCCCCCCCCCCCCNCCCCCCCCCCCCCCC
CCCCCCCCNCCCCCCCCNNCNCCNCCCCCCCCCCCCCCCCCCNCCCCCCCCCCCCCCCCCCCCCNCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNCCCCC
CCCCCCNCCCCCCCCCCCNCCCCCNCCCCCCCCCNNCNCCCCCCCCCCNCCCCCCCCNCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNCCCN
CNCCCNCCCCCCCCNNCCCCCNCCCCNCCCCCCCCCCCCCCCCNCNCCCCCCCCCCCCCCCCCCCCCCCCCNCCCCCCCCCCCCCNCCCCCCCCCCCCCC
CCNCCCCCNCCCCCCCCCCCCCCCNCNCCCCCCNCCCCNCCCNCCCCCCCCCCCCCCNNCCCCCCCCCCCCCCCCCCCCCCNCCCCNCCCCCCCCCCNCC
NNCNCCNCCCCCNCCNCNNCCC
>LE_HBa0033D19_SP6_6708 (trimmed for quality and cloning vector)
CCATTTCCAGCATTTACAATTANTCTGCATTTTTCAACCTTCCATCACATAAATAAACATTTTCACTAACCGCAAATAATGATTCAATCGTTTAAGCTAG
CTCATAAGAGGAGGTTTGTCCAAGTCCATATAAAGACACCAAATTCTCGTCCTTCTATCAATGTGAGACATCATAACACCGCCTTATTAGGATCGAATCC
ACACACACACTTGATGAATGAAGAACATAACAACTTTCTAGAGAGAGATGAGAGATCTAGAAAGACAAAGAGAGAAATCAATATTTCGTGGTAACACCCC
GTAGGTTAACTTCCACGGTGCTGGGGTATATATTAATAATTCAGAGTATTTTTTGTTACAGAGAATAAATAGTATAGCCTAAAATTTAGGTCGGGGCG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.961755
Expected error %
0.559507
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0033D19
Clone
Clone name
hba-33d19
LE_HBa0033D19
P033D19
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found