Clone Read LE_HBa0145G18_SP6_71362

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0145G18_SP6_71362
Primer
SP6
ID from Seq. Facility
LE_HBa_145_G18-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
18 trimmed for vector and quality, 1673 raw
Sequence
>LE_HBa0145G18_SP6_71362 (raw untrimmed)
TAATATTCTTCNGCCACGACAGCAGCTGTATGCTNTATANTCGTATGTNACAGATTATGCTTATCACTATATTNCTAACNTACGCGACACTAGGTGCGNA
TGTATCTCATCATCTACTGCNTCTGTCTGCACGCTAGTGATAATAGATAGCCTCCTTCGAGCATNTGTGAGCGCNCCNATCATCTCAAATTCGGCCTCTA
GTAGGCTGGNATAACATTATCACTCTAGTTTTCGNTCANCAGTAAGNANTCGTGCNTGATCATNTAANNGAGAGTAATAGGATGAGCNCATNAGTNACCT
CCAGCATAGCAGCCACACCTCTACACACTATCCNANATTNCNAGNCAGTCTATGGCCCATCGGAAAATGGCGACTGNATACTCGTGCNCGACACCTAGCA
TNTGGCAGAGTTCAGTNTTTCTGCCTTCCCATATACCNTGGCAGCTCCATCTGCTGTGCTGCGTNGAANATGTAATANGNGTANANCNGNCNTNCGTGGT
CGTTAGACGGGNTNCNCTACANCGCGTAACANTGTCCNCTCGACATTCTTCGCAGTCGACTCGGCCTAATTAGGTTNTTATACGCCACANAGACCCACTC
NGNAACATGCTCACAGATCCTAGACCGATCACTCCGTCCTTGAATCCGTCGTAATAACTCACACTTGTGGACGGAGGCTCGGGCAAATCCCGCACAGTTA
GTCNAAACTTCTGCCGATCACTAACATATGCTCAGTAGGCATTAGTTAACAGAAGATGTTTTGAGTCTTAAGACCGTATTCGTACGTCGTCCAGTGTAGC
TTATACGCTACTATCGCTTATCGAATCGTCGCGCACAGTGGTACAAGATAGTAAGNCAAGGAAGCATATNAGGTTATTAAACCTCTTCACTGCTAGAGCC
ACACTATGATCACGCTATATAGTTGCGTAGTACTCCATANACCTTTTGTTCTCGCTATACTCGCTTCCTCTTGCTGTGTATACAGAGCACGAAATCTGCC
ATCAGTAATATATTGCACTATTTTTGGNCTATATTTCCNCTTTTNCTACACTCCNATCTTGTTCACTGAATATTACAAGGCGGAGNATTAGAGCTGTCGA
GTGTTTCGTATCGTCGGAATAAGTTTGATCTATCTCTTNCCCATGTGATGCCGCCTCTTTCGGAGATAGACCTTNCTATTANCCTTTATGTTACCNTTCT
GCTTGTCGAACCTAAGGTTATATCGCTGTACTCACTTTTATGTGACCACACTTACATAAAATTGCCCTTACCACACTTATATACCAGCAGGGCATTCTAC
CANGCTCCATTNAACCTATCCTAACCGCACTACAAAGGTTAGGTTGTAGTCCTATTCTTAAGGTGTGTCCGACTGGGGATAAAACTATCTCCTATTGGAA
GTGATTGGACAAGCCTNCCAGTGGCAACTGTTATATTTCGCGANCATTAGCTCTCTATTGTGAAATACCATATATTTGTAGACTCTCTCTCCTTTAATCT
CATAGATAATTTTATGTATGGTTTTGGTATATCCTCATAAAATCGATATTCTCTCTCACGCCATGCGTGGACTNATATACTTACCATATATAACTCCTCT
TTTGCTCACCTCTTTTTATATTTCTCCATTTCAGTANACAGCATCTCCTCCTTATTTCTATATCCATTTTATT
>LE_HBa0145G18_SP6_71362 (trimmed for quality and cloning vector)
ACTTCTGCCGATCACTAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.976726
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0145G18
Clone
Clone name
hba-145g18
LE_HBa0145G18
P145G18
Clone type
BAC
Contamination
none
Estimated length
122,346
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found