Clone Read LE_HBa0145G18_T7_71363

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0145G18_T7_71363
Primer
T7
ID from Seq. Facility
LE_HBa_145_G18-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
478 trimmed for vector and quality, 886 raw
Sequence
>LE_HBa0145G18_T7_71363 (raw untrimmed)
TTTACCCCGGTCCCGGGGGGATCTCTAGAGTCGACCTGCAGGCATGCAAGCTTGAGTCTGCTCTTCGTGCCCATGATGGTCCGTCCTGCTCGTGCGTCTA
GCTGTCTCATGTGTGATCCCGTTACCCACTCTCCATTACTCGCAGTGTTCTAGCCCGAAGACTCTCGTGTGACCCCTGTGGCGCCTACTGACCGACCTAC
CTCCCTTCAATTGCATTGCACACAATGCCCTCATTCCATTCCGGAAACCTGACATGACAGCTGCCTTGATGAACCGTCCAGCCCAAAATCATTCCTCCCG
CGGTCTGTCGACCCCACTTCTTTTTGGCAAATTTCTAGCAAATAGATTCCTTCTTTCATTAGGTTTTTATTTTTTATTCATAGATTCGCAAACCTCGTTT
TTCAGATTACCCCGCCGGATAGTTAGAATCTTACATCGCTACACTCCATATTGCTAAACACCGTATTATTACACTTTGCGTACTACCGTCAAATTTGCAG
ACTCTAGCGGGTGATTTTTGGTGATTCATCCGCCGATCTTTTGCATTTTACTCTTTCTCATTGAATTAAGTACGTGAACTCCTGTTGCAAATATTTGAAC
CTTGTGGTCCTGGCCTTGACCACCTCAGCTCCATCCTCCCGGTTGTGGGTTCAAAAGACAAATATTGTCCATAATACCCCCTCTACGCTAACATTCCTGC
TTACTGCTTTGCACTTCTCATTTTTCTTTATCTTTGTACTTTTTTCTTTATTTCCTACGGTATGAACTTCCCAACATGCAAACGACTTGTCAAATTTGTG
TATAACCAACAAATATGATCAAGCTAGCACTGAGTCTCACCTTCTCCGTATCTATCGCCTATGGTACTCTGAATCATTTTTCCATC
>LE_HBa0145G18_T7_71363 (trimmed for quality and cloning vector)
AGCTTGAGTCTGCTCTTCGTGCCCATGATGGTCCGTCCTGCTCGTGCGTCTAGCTGTCTCATGTGTGATCCCGTTACCCACTCTCCATTACTCGCAGTGT
TCTAGCCCGAAGACTCTCGTGTGACCCCTGTGGCGCCTACTGACCGACCTACCTCCCTTCAATTGCATTGCACACAATGCCCTCATTCCATTCCGGAAAC
CTGACATGACAGCTGCCTTGATGAACCGTCCAGCCCAAAATCATTCCTCCCGCGGTCTGTCGACCCCACTTCTTTTTGGCAAATTTCTAGCAAATAGATT
CCTTCTTTCATTAGGTTTTTATTTTTTATTCATAGATTCGCAAACCTCGTTTTTCAGATTACCCCGCCGGATAGTTAGAATCTTACATCGCTACACTCCA
TATTGCTAAACACCGTATTATTACACTTTGCGTACTACCGTCAAATTTGCAGACTCTAGCGGGTGATTTTTGGTGATT

This is probably not a useful sequence.

Problems:
  • High predicted error rate
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.97316
Expected error %
5.66981
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0145G18
Clone
Clone name
hba-145g18
LE_HBa0145G18
P145G18
Clone type
BAC
Contamination
none
Estimated length
122,346
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found