Clone Read LE_HBa0145N03_SP6_71668

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0145N03_SP6_71668
Primer
SP6
ID from Seq. Facility
LE_HBa_145_N03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
4 trimmed for vector and quality, 859 raw
Sequence
>LE_HBa0145N03_SP6_71668 (raw untrimmed)
GATTATAAATGGGGACTGTACCTGGAAAGTGATTTAGCATTGTGATAAAACGTCAGGATTTACCATCCTCAACTCTTTTTTCCCACCGCAGAGAGAATGG
TGGTAGGAGGTTTAGGAATTTTGATGTGGCTTCAGGGTGGTGCTACTACTGAGGTTGTTCACAACATATATGTTGATGTTGTTATCGCTTGACTCGAAAA
CGTTATCTCATCTTCTACTAGATGTCATAGGTAGATCAATAGTTTGCATGCCTTCTCAAGTGGTGAAAGCCATGCATTGTTCAAATCTCTTACGATATAG
GTTTCTAGCTCATGATGTAGAAAATTTGAGGGGTATAAGAGATTAATCTCAACGTAATGCGAATGAACTTTCGTTTCAATAAGCAACTGTTAGAATCCCT
AACTAAATAGTTGATTTGTCATCGGCAATTAAGAATGTCTCAAGCCCTTGCAGCTCTCTTCCATAATTGATTAGTCTTCTTAATGTGTTTATCTTCTATA
ATCTACTTTTATTGAGATCATTTTTAACATAATATATTTGATTTTTTTCTGTTTTTGTAGAATTGTTATTAACTTTTAAATACTCGATTCAGACGCTTTT
GTTTCTTTTTTTTTCTTCTTATAATCTATTATTTCTACAGCTTTTTATACTATTATATTTATTTGTATTTATTTATTTCTCGTTACTCATTCCATCATAT
TGAATACCTAAACTTGAAATTGTAGGTACCTTCTTGCCTCATATTACATTTAACTATGCCTTCCTATTTGATAGATGTCTTGTACTTATCATTCTTAATC
TGTGTATTTAACTGATCCTCATGTTAGTCGGGTTGTTACTTTTGTAGATTCTGCTTTTA
>LE_HBa0145N03_SP6_71668 (trimmed for quality and cloning vector)
AAAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.404923
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0145N03
Clone
Clone name
hba-145n3
LE_HBa0145N03
P145N03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found