Clone Read LE_HBa0145N03_T7_71669

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0145N03_T7_71669
Primer
T7
ID from Seq. Facility
LE_HBa_145_N03-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
7 trimmed for vector and quality, 631 raw
Sequence
>LE_HBa0145N03_T7_71669 (raw untrimmed)
ACGCTACACTTATTACTAATATGATTTGTAAGATTGATGTGGTAAAATGACATGTTATTTAGTTCCTTTTATCATTTTGAGAGTACTTGTCGTAAGCCTA
TATTGTGGCATATTATATTGCAGCAAGGGCTATACCCAATATGGTAACTCACTAACAGATTGTTTAAGTAGAGATAACTCCTATACTATAGTACGGGAAT
AGGATGTATCTCCTAAACAAAAAGGAATTAAGGACACTGCTAAAACTGGTATATTGGTTAATACCAGGGTTAAAAATGACAAGTCTTTTCATGTTAATTA
CACTACGTAAGTTGTATTGTTATGTTTGTATGATCTAGAGCCATCTAACTTCCCCCAGTCCCTTTCACTACTCTCCTAATCATATCGATGGCCTATCTCG
TTGTTNAATGAGCTATAATATCGTGCCTATTTTATTGTTATACTGTAATCATGAGTTTGTGAGTAGTGATTGTTGCAATTCTTGTAATTTGTCTGTATTC
CATCTCTAATTTACCTGTCTTGTTCTTGGCTGCTCGCTCTTGCCTTGCTTCTCCTCGNTCCTTTGTACTGATGCTGTACTGTCGCTGTTCTCCTTTAGAT
TACTTTGTGTTCTCTGTATGTTTCTCTGTTT
>LE_HBa0145N03_T7_71669 (trimmed for quality and cloning vector)
AGCCTAT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.570817
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0145N03
Clone
Clone name
hba-145n3
LE_HBa0145N03
P145N03
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found