Clone Read LE_HBa0160B12_SP6_76486

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0160B12_SP6_76486
Primer
SP6
ID from Seq. Facility
LE_HBa_160_B12-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
594 trimmed for vector and quality, 949 raw
Sequence
>LE_HBa0160B12_SP6_76486 (raw untrimmed)
ATAAATTCCGTTTTTGGGGGCGTATTTGAATTAGAACTCATGATACAATGTAATCGGCCTTCATTGTTTCTGTTTTAGTTTTATACGTTAAATGTAATCT
TTCTTTTACTTCTAATATTGTTTAGCATATAATGTAATATGTCGATTTGCTGAATGTCTAGGTGGAGCATCCGGTGACAGAAATGATATCCTCTGTTGAT
CTGATAGAGGAACAGATCCGTGTCGCTGTGGGAGAAAAGCTCCGATACAAACAGGTAACAGAGAACAATCAATTTTTCTTTGAATTGGACTTCTTTTTCT
GGAAAGAGACGGACAGGGAAAATTATGACGATTTCAGTGAAAAGTTATGTTTTGACTTGTACTATATTAAAGTGAGAGTTAAAAAGTCTGTAATGCTTAA
AGTAAGTTGCATGGATGTAATGCGGGGCATAAAAGTAATTTTGTAGTGTATAAAATGGTCCTTTGGTGCGTTGTATTATATAAGGTTGATAGAGAAATCA
GATGAGAAATGATAGGAAGAGTTCCTCTGAGGAGTGAGGATATCTGTAAGATCGCCAATAACAGAACTATGGTTAATTATCTAATTTTCATTTGTTAATT
TGTGTTCTTACTTACAGGAGGATATTGTGCTTAGAGGACATTCAAGTGAATGCCGTATAATTGCAGAAGATGCTTTCAAAAGCGTCAGACCCGGCCCATG
TTTTATTGGGTTTACGTTCGTAGAATAATATTTTCCGTTGTAGGGGGATTGGTGACCAACAAGGCAGACTCTGGCAAAATTTTATTAACAATTTTATGTT
GAATCATCTTTCATTGGGAGAACCGGCCGGCCCTCGGTAAAAAAATTATTTGGTGTTTCGAATGGTTGGTCTTAGGTAAAAAAATCCTCAGATGTTTTTA
TAGTGGTTTATGTCCTCTGCATGTAATTGTGCCGTGATAAATTATTCAT
>LE_HBa0160B12_SP6_76486 (trimmed for quality and cloning vector)
TGTAATCGGCCTTCATTGTTTCTGTTTTAGTTTTATACGTTAAATGTAATCTTTCTTTTACTTCTAATATTGTTTAGCATATAATGTAATATGTCGATTT
GCTGAATGTCTAGGTGGAGCATCCGGTGACAGAAATGATATCCTCTGTTGATCTGATAGAGGAACAGATCCGTGTCGCTGTGGGAGAAAAGCTCCGATAC
AAACAGGTAACAGAGAACAATCAATTTTTCTTTGAATTGGACTTCTTTTTCTGGAAAGAGACGGACAGGGAAAATTATGACGATTTCAGTGAAAAGTTAT
GTTTTGACTTGTACTATATTAAAGTGAGAGTTAAAAAGTCTGTAATGCTTAAAGTAAGTTGCATGGATGTAATGCGGGGCATAAAAGTAATTTTGTAGTG
TATAAAATGGTCCTTTGGTGCGTTGTATTATATAAGGTTGATAGAGAAATCAGATGAGAAATGATAGGAAGAGTTCCTCTGAGGAGTGAGGATATCTGTA
AGATCGCCAATAACAGAACTATGGTTAATTATCTAATTTTCATTTGTTAATTTGTGTTCTTACTTACAGGAGGATATTGTGCTTAGAGGACATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.941536
Expected error %
1.89904
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0160B12
Clone
Clone name
hba-160b12
LE_HBa0160B12
P160B12
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found