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Clone Read LE_HBa0160H08_SP6_76766

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0160H08_SP6_76766
Primer
SP6
ID from Seq. Facility
LE_HBa_160_H08-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
750 trimmed for vector and quality, 968 raw
Sequence
>LE_HBa0160H08_SP6_76766 (raw untrimmed)
GCCCGGCTATTGGATATGTATGAATGAGTTGTGAATCTGTTCTGAGAGTGTGTATTGAAAAGTAATCTTTATACTCAAACAAAAATCGTTGTGTGAAAAA
ATAGGATATAGTTTTGAAGTGAGGAAACTAGTTGCAATACCAGAAATATTAGCACCTCGGTGAGAAATTGAAAAGGATAGGTGTTAGTACATGGTGAGTC
TGTGTCATGGTCTGATTCCACATAATTCAAGACTAATAGTGATAGCATAAATAAATATGACGAGACTGATCGTGATTGATAGCCAAATGATTGCGAAAGA
TAAAACATGGACACTATTGTACAAATATATTTGATTGAGTCATAGTGCGTCGCTTGAGGAAAAACAAAGAATTTAAGTTGAGGGTGTTGATATAGCGTGG
TGTCACCGTAGTTTTAATGCTTTTTCCTTATGTTTAGTGTGTCCAAAAGCCTTTTTCTATTAATTTTTATATATGTTTCTCTTTATTTGCTAAAATTTGT
CTAAAAGATGAATGCGGAGGTTTTTGAGCATGAAATGCAGAAAAGTACCACCGATGGAGCTTGTGACGGTCCATCATGCCCTGTCGTCGAGGGTAATGAA
GTTAGCAACAGAAGAAATTGCATAAGCATGGGACGACGGAGTCCATGACGGCCCGTCGTGACCACGACGATCCGTCGCGAGGTCCGTCGACCCAGCCGCG
TTTTGACAAATTTCCACCAAATAGAGTCCTTATTTAATTAGGTTATTATTTTTTATAAATACTTTGAAAAAACCTCGTTTTTAAGGTTAGACTCACGATT
ATTTTTAGACTCTTTGTTAGACTCGTGATTATTTTTAGACTCTTTGTTCGACTCTTGATTATTTTAAGACTCTTTGTTAGACCCTTGGTTATTTTTAAAC
TCTTTGGTATTTGAGCTTCTACTGTGGATTAGACTTGGTGGATATTGGTACTCTTTTGGAGATCCTAA
>LE_HBa0160H08_SP6_76766 (trimmed for quality and cloning vector)
TGTATGAATGAGTTGTGAATCTGTTCTGAGAGTGTGTATTGAAAAGTAATCTTTATACTCAAACAAAAATCGTTGTGTGAAAAAATAGGATATAGTTTTG
AAGTGAGGAAACTAGTTGCAATACCAGAAATATTAGCACCTCGGTGAGAAATTGAAAAGGATAGGTGTTAGTACATGGTGAGTCTGTGTCATGGTCTGAT
TCCACATAATTCAAGACTAATAGTGATAGCATAAATAAATATGACGAGACTGATCGTGATTGATAGCCAAATGATTGCGAAAGATAAAACATGGACACTA
TTGTACAAATATATTTGATTGAGTCATAGTGCGTCGCTTGAGGAAAAACAAAGAATTTAAGTTGAGGGTGTTGATATAGCGTGGTGTCACCGTAGTTTTA
ATGCTTTTTCCTTATGTTTAGTGTGTCCAAAAGCCTTTTTCTATTAATTTTTATATATGTTTCTCTTTATTTGCTAAAATTTGTCTAAAAGATGAATGCG
GAGGTTTTTGAGCATGAAATGCAGAAAAGTACCACCGATGGAGCTTGTGACGGTCCATCATGCCCTGTCGTCGAGGGTAATGAAGTTAGCAACAGAAGAA
ATTGCATAAGCATGGGACGACGGAGTCCATGACGGCCCGTCGTGACCACGACGATCCGTCGCGAGGTCCGTCGACCCAGCCGCGTTTTGACAAATTTCCA
CCAAATAGAGTCCTTATTTAATTAGGTTATTATTTTTTATAAATACTTTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.96394
Expected error %
0.0341399
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0160H08
Clone
Clone name
hba-160h8
LE_HBa0160H08
C03HBa0160H08
P160H08
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found