Clone Read LE_HBa0166B15_SP6_78028

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0166B15_SP6_78028
Primer
SP6
ID from Seq. Facility
LE_HBa_166_B15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
694 trimmed for vector and quality, 830 raw
Sequence
>LE_HBa0166B15_SP6_78028 (raw untrimmed)
GGTTATTGCTCCCACTTCAAGTTCAATATATCCCCACACGAAATTGGGGATTAAAGAAGAGATTTTTAAGCCCGATTAGAAGAGTAAAATTAGAAAATAT
ACAAAACCCAACAACACCAAACTTAATTCAAAATTCAGATTCAGAAAGTAGAGAGAAAACCCAAATGCTTTTTCAACTCTTACTTGTTCATATACGAACC
CATAAAGCTTCTTCTTCCATTCAAATTGCTTCGCATTTCAATTCTTCTCCGCAGCTATCTTTCTCTCCCCCAAAAATCACTGTTCTTAATCAGAAAAAAG
ACGAAGACCCACCTTCTACTCTACACACACTCTCTGATCTCTCTCCCTTCACCCTCTCTCTCTCTCTCTCTCTCTCTGTGTAAATCGAGACTCTTTTTTC
GTTTTTGTGTCTGATCAGAAATAGCAAATTCTTTTTCTGTAAATTTTCTGTTCCTATTTTTCCCTTCTTCCTCCATACCAAACACGCCCTTAGTGTCTCA
CGTCCTCACGCTCTCTCTTCCTCGTAAACTCGCACGCGACCGGTAATTAAGGGTTCAAGAAGCGTTTGAGCTTCACACACAGGCGTGCGCGTGGGTATTC
TTGTTTTTTAATGATATGTTTGATGAATTTTGCTTAAATTATGCTATGGGAAAAATAAAAAAGAGAACTTTTTTTTTTATTTTTTGCAAGAGTTAAGTTG
TAAAGAATGGTTTTTTTTTTGGGTGGGGGGGGGGGGGGGGTGGGTGTAATCATATTGTGTGTTAGTTGTGGGGTTTTTTTCTTTGTTGGTGTCCCGTGTT
TGTTTCTTGTAGTGTGTTCTTATCTACCTT
>LE_HBa0166B15_SP6_78028 (trimmed for quality and cloning vector)
GTTCAATATATCCCCACACGAAATTGGGGATTAAAGAAGAGATTTTTAAGCCCGATTAGAAGAGTAAAATTAGAAAATATACAAAACCCAACAACACCAA
ACTTAATTCAAAATTCAGATTCAGAAAGTAGAGAGAAAACCCAAATGCTTTTTCAACTCTTACTTGTTCATATACGAACCCATAAAGCTTCTTCTTCCAT
TCAAATTGCTTCGCATTTCAATTCTTCTCCGCAGCTATCTTTCTCTCCCCCAAAAATCACTGTTCTTAATCAGAAAAAAGACGAAGACCCACCTTCTACT
CTACACACACTCTCTGATCTCTCTCCCTTCACCCTCTCTCTCTCTCTCTCTCTCTCTGTGTAAATCGAGACTCTTTTTTCGTTTTTGTGTCTGATCAGAA
ATAGCAAATTCTTTTTCTGTAAATTTTCTGTTCCTATTTTTCCCTTCTTCCTCCATACCAAACACGCCCTTAGTGTCTCACGTCCTCACGCTCTCTCTTC
CTCGTAAACTCGCACGCGACCGGTAATTAAGGGTTCAAGAAGCGTTTGAGCTTCACACACAGGCGTGCGCGTGGGTATTCTTGTTTTTTAATGATATGTT
TGATGAATTTTGCTTAAATTATGCTATGGGAAAAATAAAAAAGAGAACTTTTTTTTTTATTTTTTGCAAGAGTTAAGTTGTAAAGAATGGTTTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.952592
Expected error %
0.39979
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0166B15
Clone
Clone name
hba-166b15
LE_HBa0166B15
C03HBa0166B15
P166B15
Clone type
BAC
Contamination
none
Estimated length
51,222
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found