Clone Read LE_HBa0021B10_SP6_79554

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0021B10_SP6_79554
Primer
SP6
ID from Seq. Facility
LE_HBa_021_B10-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1064 raw
Sequence
>LE_HBa0021B10_SP6_79554 (raw untrimmed)
TGATGAGGGAGGGGGGGGGGCCGGGGGAAGTGAAAAGAGTGTGTAAAAAGAGCGTAGAAGGGAAGGCACGCACCAGACTGCNTCGGCGTTTACCTACACA
CCTTTGCACCTACAAAAATGATGGATAGGCTACGAATAGAGGGGGGATCGATTACACTCAAGACGTTTCGCAAACGAATATCTCCTGTTCCCTGAGATAC
TATCATAAAAAAGAGGAGTCCCGCTACCGGAAGGTGAAGAGCATGGTAAGGTGAGGTGTTGTACAATATAGGATATTTGCTTTTGCACGGCGCGAGGTTG
ATGTTACGCGGAGTAATATTGTTAATGTGAGCATGTAAGCTTATCAGCCATGTACGGCTGAGCGATATCATGGTGACTCCGACGAAAATAATAAACATCA
TAAACTGTACAAGAGAGACTGTTTCTACTTGATAGTGGTGGAGACGAGAATTACCTGACTAAAGAATAACAAATGTCGACCGTCACATTAAGGTAAAGCG
TACTATCTAAATATTTGTTAAGTGCATGGTGTCGCTGTGTTCTGAGTATAATAGCTCTTAGTTAATAATGTTGAGTTTTCCTGTACGATTAGCCTGTGTT
TTTCTCTGTTTCTACTCGCCCACAAGTCTGTACGTGTTAGATACTGATTAACTACAAGCGTACCGCATTATATTAATAAACGACCATATAAGCCATACTT
TTTCGCCGGGGTTGCTCGACGTGTGCCTTCGTTTATGCTCTGCATATGAGTATATCTCCTGACGTTATGAAATGATATTAAGAGACAATTATGAGATCGT
AGTAATCGTCGAGAGCACTCAAGGAAAAGGTATACTGAGCATCTATGAGAGGATAATTTACATATACTTCGATCAAGCAAGTTTGTAATGTTGGGTGATA
CACCTTACGAGTAGGTGCTCCGTGATGTCTGTGTAGTGTTCTGCGGCTAGACTGCGCACCTGCGAGGCGATGAAGGGGTGGATGTGGTTTGTTGGTACTG
CAATTGTTGGACCTGTGATATCGGAATTCGCTCTGTAATGGTCTTAGCTCTTCTTCCAAGTTTC
>LE_HBa0021B10_SP6_79554 (trimmed for quality and cloning vector)
GGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.667458
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0021B10
Clone
Clone name
hba-21b10
LE_HBa0021B10
P021B10
Clone type
BAC
Contamination
none
Estimated length
127,613
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found