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Clone Read LE_HBa0021B10_T7_79555

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0021B10_T7_79555
Primer
T7
ID from Seq. Facility
LE_HBa_021_B10-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1143 raw
Sequence
>LE_HBa0021B10_T7_79555 (raw untrimmed)
ATACAACAAAACTACAAACAATACCATCACGAAGGCCCAAACATAAACACATTTTGATGGGTACACCACCACTACCAACCAAACCCTATCTCTTGTACAC
TCTCCCCTATTCATTTATACTACTTACCTTCTATCTCGAAATAAAGTTTTACTACTAAAAGGAATTCATTATATAAATCTCCACAATCCACCACCCCCAA
TAATTACTTATTCACCACCAATCACAATACCTTCTTCCACATAAGCGCTAACCCATNTTACACCCTTATTTTCTACTGTTAATACCATTAGATCTGCTCT
ACTTTCCTATCCATATATACACGAGAATTATCAAATCACCCCACCACTCATCTGACAAAACATCCACCTCACCCACCCTCCCCCACAATCCTCATTTCAC
TCACTATCCCATCAATCCTGTCCCAAAAAAACACACCCTCCCCCTCTTCTTNTTAAACTATCCATATTATTAGTAACATATTCCTATATTTCTTCTACAG
CTTCTACCTAAAACCAATCCAAATGAACTCTGTCCATATAGACACCCTACAACCCAATTCAATCAACACCACACTACAAAAACAACCATAAAACACCCAC
TTTTTTTTTTATAAACACACACCCCACCACCAAAAACACACGACCCACACAAACCAACCCCACACCGACTATACACCACAGCACCTCAAATCTACACGCA
CGCTCACTAACTCTATTCCTGCTATACTGATAACCAACATACCACAACCAACCCAACAAAATAATTCTCATTGACACACACCAATAATTTCTCTACTCAC
TACCTATTACCTAAAACTCACTGCTCAATAAATCAACATATATACAACACAACAAAATTAAAACGAAACATAACATAACCTCCATACTATAAAACCTATA
ACCACCGAAACACTCACACGCACAACACAATTAACCACATCACTTATACTTCCTAATTTATCAATAATAATCTAATATCACAATCTCCACTAATACCATC
CATACACACATTACCAACAACAACCTCTCTACTACACTTACATACTACCCTTCATTAACAATATATATCACTACAAATATTACCACATTTCATATATAAA
TACCTATACATCACACATTAATAAATATACAATATCACTAAGA
>LE_HBa0021B10_T7_79555 (trimmed for quality and cloning vector)
A

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
  • High predicted error rate
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0021B10
Clone
Clone name
hba-21b10
LE_HBa0021B10
P021B10
Clone type
BAC
Contamination
none
Estimated length
127,613
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found