Clone Read LE_HBa0037E22_SP6_80490

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0037E22_SP6_80490
Primer
SP6
ID from Seq. Facility
LE_HBa_037_E22-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 1231 raw
Sequence
>LE_HBa0037E22_SP6_80490 (raw untrimmed)
ATAAAATTTGTTCTTCTCTNTTAAGCTGACTGNTNGAGTANNCNNNNNNNNNNNNNNNNNNNCNNNNNNTCNNNNNNNCNNNNNCNNNNCCNCNNNNNCN
CNNNNCNNNNNCNNNNCCCCCCTTTTCTCGTGTATNCCCNNCTCCTCTTCCCTNTNTNCTCTTTCTNNTNCTTCCTTCCCCTTTCTCTTCGCTCCTTCCC
CTCCTTCTNTTCTCTCTCCTTCCNCTTCTCTCTCCCTCTTCTCTTCTCTNTTCTTTTNCCCCTTTCTTTTTTTTCTTCTCTCCCTTCTCTTCTTCTTTTT
TNTCCTTCTCNTCTTCCTTTTTTTTTTTTTCCTTTCTTTTTCCTCTCCTNTTCTCCCCTNCCTCCTCTCTCTTCTCCTTCTTCCTCTTCTTTTTCCCTTC
CTCCCTTCTTCCCTCTCTCTTTTTTCTTTTCTCCTTCCTCTTTCTCTTCTCTTTTTTCTTTTCTCTCTTCCCTTCTTTCTTCCCTCTCTCCTCTCCCTCC
TTNTCTCTCTCTTCCTCTTTTTCTTTTCTTNCCTCTCTCCTTTCTCCTCCCTTTCTCCNCTCTCCTTCTTCTNCCTTTCTCCNCCTTCTCTCTTCTCTTT
TNTTTCTTTTCCTTTTCCTTCTCTTTTTTTCTTTCTTCTCTTCTTCTTCTCTTTTTTTTTCCTTCTCTTTTTTTTCTTTCCTCTCTTCTCCTCCTTCTCT
TCCTCTCTCCTCTCTCTTCTCTCCCTCTCCTCTTCCCTTCCTCTNCTTCCCCCTCCCTCTCTTTCCCTTCTCCTCCTCCTCTCTCCCCCNCTCCTTCCCC
NNCCTCCTCTCTCCTNCCCTNCCTTCCCTCCTCTCCCTCTTCCTCCTCTCTCCCTCTCTCTTCTCTCCCTTCCCTCCCCTCTCCTTNCCTCTCCCTCCCT
CCTTCCTCCTCTCCTCCTTCNTTCTTCTTTCCTCTCCTTTTTCCTTTCTCTTCTCTCTCTCCNCCTCTTCTCTNCTTTTCCTCTCTCTTCTCCTTTTCCT
CCCTCTTTCTCCTCTTCCTCTCTCCCCCTTCTTTCTCTCTCNTCTTTCTCCTCTCCCTCTCCTCTTTCCCTTTCNCTCCCTCTTTCTTCCTTCCNCCTCT
TCTTTCCTTTTNCNCTTCTTTTCTTTCTTTTNCTCTCCCNTTCTNTTCTCTCTTCCCNCTCTCTTTTTTTTCTCCTCCTCTTCTCTTCTCTCCTTTCTCT
TCTCTTCTTCTTTCTCTCTCCTCCTCTTTCC
>LE_HBa0037E22_SP6_80490 (trimmed for quality and cloning vector)
CTCCT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.839283
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0037E22
Clone
Clone name
hba-37e22
LE_HBa0037E22
P037E22
Clone type
BAC
Contamination
none
Estimated length
136,547
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found