Clone Read LE_HBa0037E22_T7_80491

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0037E22_T7_80491
Primer
T7
ID from Seq. Facility
LE_HBa_037_E22-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
31 trimmed for vector and quality, 889 raw
Sequence
>LE_HBa0037E22_T7_80491 (raw untrimmed)
GGGGGAATCCTCCTAGAGTCGACCTCGCAGGCATGCAAGCTTCTAAGTCTTCCAAAAAGGACCCTCTATAGGGGCCTAGNCTGCCCCAAGATCCGCACAA
GCCCCCCTTTTGGGGGGGACNCCCGAAACAGCCGCCCCACAACCAAATGCAACAGCTGCAACGGCAGCAACAGCCGCAACGTCTGACCCCACACCNGCGG
CGGGCCCCCACGGCAGCCGGGGGCGCCAGCCGGCGGCCAAGAAGGGAGACGGGCAGCCGGAAGGGACGGCGGGACGCCAGACCCACCCCACCCCCAGACG
CGACCACCGCAACGAAAAGCCGCAAAAACAGGGCAACCGCGCCGGACCGACGACCCAGGCCAGCGGGGGCCACCCACGCAGCAGCAACCCGAACGAGCAC
CGCACCACCCCCCCCCAAAACACCACACAAACCCAAGCCACAACGCAGCCAACCAACACACAGCCCGGGCACCCCGCCCCACACCCGACCGCAACCCCAA
CCGCCCCCAAACCACGGACCGGGCGCCCACAGCCAAGCGAGGCCACCCAGGAACGCACGACAGCACGACGCGAACAAACGGCGCCAAGCAGACAACGCCA
CCACACCCGAGACACACCAACGCCGACCAAACCGAGNGCCCCAGCCCCAGACGCAGGCCACACAACACGCCGCGCCCGAAAACCAACACCAGAAACGACA
CACCGCACCAGCGACACCAACGCAACAGAAACAAACAACACACCGAGAACAGAACCACCAAACAAAAAAACAACCCCCACCACCCACCAACCCACCCACA
GCCGCAACCGGCCGAGAAACACAGACAACAACGCCCCAACCCCAGCCGGCAGCACAGCACACGCAAGCCGCACCACGACGCACCGCGCN
>LE_HBa0037E22_T7_80491 (trimmed for quality and cloning vector)
GCATGCAAGCTTCTAAGTCTTCCAAAAAGGA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.41128
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0037E22
Clone
Clone name
hba-37e22
LE_HBa0037E22
P037E22
Clone type
BAC
Contamination
none
Estimated length
136,547
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found