Clone Read LE_HBa0037O01_T7_80929

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0037O01_T7_80929
Primer
T7
ID from Seq. Facility
LE_HBa_037_O01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1125 raw
Sequence
>LE_HBa0037O01_T7_80929 (raw untrimmed)
GAGTCCTTCATAGCCCGGCGCGAGTCGCGTGAGCGTTCCTTCTAGTAGACCGACCTCGCAGCGCATGTCAACGCTGTATTACCCTGTCTCCTCTCTCTTA
TCCCGTAGTA
AATTTCGATTCCAAATAGATACTTAACGCGTCTTTGCTGTGTAACCCCTATAAGATAGGATAGCTAGAACATTGCAGCTGGAATATACCC
AAACCATCAAGCTTTAGGCATCAGCTATATCGAAACAATAAGAATAAAACATACACAAGGTTAAATGAATAATAAAATTGATGGCGGCTCTAATATGGGA
TTGAAATTAGAACAATTGAAATATCGGTGTGATAGAGTGTGTAATATATGCATACTGAGGAGGTCCATATTGAGTTCCCATAGACAAAGTGATGTTTCAA
GCACTGGCGGGCNTCATCTAAACAGCAACGGCTTCACAACATACGAACCTCTGTCTTCTGCACTTAGAACACACTCTGTGGACATCGTAGCTCACTTCAA
CTTGCTAAACAATCGGTCTCGCTGACCCCGTACCACCTCATGCATCTCTATTTACAATCCTCACTAAATAGCACTCTATAATTCGATCCTCTGAACTTAC
CTATCATGATCTCAATAAAGTTGTGTGTAGGTCAGTCTACTACTATAGTGGTATAAGCTCTTACGCATGCCATTTGCTCTGGAAGGCAAGGCTGTAATGT
CTTTTTCAACGACGTGCTCAGCAGCGAACCGCTGCCTTCCCTAGCACTCCTATTGTTTATAGTGGAAAAACTTTTTGTTGTTCTTGCATGTAATATCCTT
GTGTTCTCTTATCTTTTGTGGGTCGCTGCGGATAACATGGTTCTAAGCGACCGGCCTCTATCTACCCAGATCATGTTGTTCGTGGGATTCCAAATAATCT
TTCTCGCTCCGACATTGTGCGCATCTGTTCCTTGCATAGCTGCTGCTACCCCTTCGAGGGCCTCCGATTTTCCCTCTCGGCACACTAAGACGCTAACACT
ACTCGAAAGTATCAAAGTGTTAGTATGCGATATGTGCTATGGAACGTGTGCCCTCGTATAAGGTCGTTCACTACAGCCACACGACAATACCCAACAATTA
TTGTCCTATCGACATACTCCACATC
>LE_HBa0037O01_T7_80929 (trimmed for quality and cloning vector)
AA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.66038
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0037O01
Clone
Clone name
hba-37o1
LE_HBa0037O01
C08HBa0037O01
P037O01
Clone type
BAC
Contamination
none
Estimated length
115,811
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found