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Clone Read LE_HBa0037O11_SP6_80948

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0037O11_SP6_80948
Primer
SP6
ID from Seq. Facility
LE_HBa_037_O11-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
593 trimmed for vector and quality, 819 raw
Genbank Accession
DU076287
Sequence
>LE_HBa0037O11_SP6_80948 (raw untrimmed)
GGGGGGGTTTTTTTTTTTATTTTTTTNCGACCATCCAAATNTCGCAATATTNGCATGATTTTCGAAAAAAATCGTGTTGTATAGATCATCAAACAGGTTT
ATTTCTTTAAGTGTTTATTTTTTTCTCTAATTCTTTTGTCAAATTATTTAATTTTAATATGTTGTTGCTTGATTTTAGGAGAAATTTACGTTGTATTAAT
AATGCAGATTTCTTCAAGTTTTATATTTGTTTATGTCAAATTCTTTAATATTTATTTGTCTATAAATTTTTAGGATCTGGTTGTTGAATACAATGTCTAA
ACCAAATACCCTAAGGAGATTCACAAGAGGTACAAACTATACCGGTTACTTCATGGTTGAAATACCATCTTTTGATCTATGGATAACTCAAATTCAATCG
AAAATCTCAGGCTATACAGCTGCGATGGAATTAGAGAAGAAGTCGAATGATGAACTAGTAAGGTCTAGTCCTTCTAAAAGGAAAGTAGTGTCAACGGGGA
AAACAATCGGAAAAAAATATTACAAGAGGAGGAAAGTAAAAAATTCTGTTTCGGACATGATTGGAGAACCGATTGTTAATGAAGAACAAGACGAAGTTAG
TGAAGAATCACATAGTTCATCAATTTCTTCTTCTTCGTCGTCTTCTTGGTGTGTGAAACCAAGAGATGATCTTGACTTGTTACAAAATCCAGCCATAGAA
GATCTTGTAAACACTCATGTCTGCATGTTGTAAAAAATATATTTAACTATATTAGTCATTATAATTTTAACCGGTTGAATTAATGGGTGATAGCCTTTAA
TGAATAATTTGCCCTTTTA
>LE_HBa0037O11_SP6_80948 (trimmed for quality and cloning vector)
GCAATATTNGCATGATTTTCGAAAAAAATCGTGTTGTATAGATCATCAAACAGGTTTATTTCTTTAAGTGTTTATTTTTTTCTCTAATTCTTTTGTCAAA
TTATTTAATTTTAATATGTTGTTGCTTGATTTTAGGAGAAATTTACGTTGTATTAATAATGCAGATTTCTTCAAGTTTTATATTTGTTTATGTCAAATTC
TTTAATATTTATTTGTCTATAAATTTTTAGGATCTGGTTGTTGAATACAATGTCTAAACCAAATACCCTAAGGAGATTCACAAGAGGTACAAACTATACC
GGTTACTTCATGGTTGAAATACCATCTTTTGATCTATGGATAACTCAAATTCAATCGAAAATCTCAGGCTATACAGCTGCGATGGAATTAGAGAAGAAGT
CGAATGATGAACTAGTAAGGTCTAGTCCTTCTAAAAGGAAAGTAGTGTCAACGGGGAAAACAATCGGAAAAAAATATTACAAGAGGAGGAAAGTAAAAAA
TTCTGTTTCGGACATGATTGGAGAACCGATTGTTAATGAAGAACAAGACGAAGTTAGTGAAGAATCACATAGTTCATCAATTTCTTCTTCTTC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.930244
Expected error %
0.41391
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0037O11
Clone
Clone name
hba-37o11
LE_HBa0037O11
C08HBa0037O11
P037O11
Clone type
BAC
Contamination
none
Estimated length
117,116
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found