Clone Read LE_HBa0069E09_SP6_83536

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0069E09_SP6_83536
Primer
SP6
ID from Seq. Facility
LE_HBa_069_E09-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
723 trimmed for vector and quality, 952 raw
Sequence
>LE_HBa0069E09_SP6_83536 (raw untrimmed)
GGGCCTTAGGGGAAATTTACCCTGATCAATCTGATGCAGCACCTCTTCTCTCCTTGCTGTCTCTTCCTCACTCTCATACAACTCTGATTCCTTCAAAAAC
TAAACAAAAAAAAAACTCAAATTCAAGGGCGAAATTGAGTTCAAATCATATAAACCTAGGAAAAAAATTTAAAAAAATTGCACATTTTCTAATGCTTCAT
TTCTTTGAAGATCTGCCTCGGTGGGCCCAGCAAGAGACAAAGGCTTCGTAACTCCCTGCTTCTTCGGGGGTGGCGCGGCCTCTGCCGCCGCCGCCACCAC
CGGCGGCGGCGTTAAGCTCTCGGAACCCATCATGAATTACCAAGAAAATGAGCAAATTACAAAATAAAGAAAAAACCCCAAAATCAAAACTTTACAGATC
AAACCTAGAAAATGGCGAAACGAGAAATTGAGTGGGCAATTTCATATCTGATTCGACTGAAAAGGAACAAATCTAAATTAGAATTGAGCAAAGTGGGGAG
AGAAAGAAGGAGGGAAGGAGAGATCTGGGGAGAAAGAAAAGGGTAGAAGCAAGTGTGGAAGATGGAAAGGGGTCAATCAAAGCGGTTTCTGGAGTTTTCC
GGTGGTTGAGCCCCAGGGAGAAAAAGAGTATTTTTCGATTGGTAGTCAAATTGGTCAATTAATAAATTTGTTGTTTTCTTATTTTTCAAAACCACTTAAT
ATGAGAGGGTGATTAAAAAAAAAAGATAAATTACACTGACTTTGAGTTTATAAATTAGTTACATTTATATAATAAATAATTCGCTAGAATATAAAAATAT
ATATGTATAAAATATAATTATGTAATTGAAGTACGTATTCATTCCCCTCTCCCCCCCCCTCTGGCCTTTTCCCCTCATCCCTCCCCCCCCCCCCCAATCT
ACTTACAATATAAAAAAAGCATATGTTTATCCACAATATTTAACAATTAACT
>LE_HBa0069E09_SP6_83536 (trimmed for quality and cloning vector)
TCAATCTGATGCAGCACCTCTTCTCTCCTTGCTGTCTCTTCCTCACTCTCATACAACTCTGATTCCTTCAAAAACTAAACAAAAAAAAAACTCAAATTCA
AGGGCGAAATTGAGTTCAAATCATATAAACCTAGGAAAAAAATTTAAAAAAATTGCACATTTTCTAATGCTTCATTTCTTTGAAGATCTGCCTCGGTGGG
CCCAGCAAGAGACAAAGGCTTCGTAACTCCCTGCTTCTTCGGGGGTGGCGCGGCCTCTGCCGCCGCCGCCACCACCGGCGGCGGCGTTAAGCTCTCGGAA
CCCATCATGAATTACCAAGAAAATGAGCAAATTACAAAATAAAGAAAAAACCCCAAAATCAAAACTTTACAGATCAAACCTAGAAAATGGCGAAACGAGA
AATTGAGTGGGCAATTTCATATCTGATTCGACTGAAAAGGAACAAATCTAAATTAGAATTGAGCAAAGTGGGGAGAGAAAGAAGGAGGGAAGGAGAGATC
TGGGGAGAAAGAAAAGGGTAGAAGCAAGTGTGGAAGATGGAAAGGGGTCAATCAAAGCGGTTTCTGGAGTTTTCCGGTGGTTGAGCCCCAGGGAGAAAAA
GAGTATTTTTCGATTGGTAGTCAAATTGGTCAATTAATAAATTTGTTGTTTTCTTATTTTTCAAAACCACTTAATATGAGAGGGTGATTAAAAAAAAAAG
ATAAATTACACTGACTTTGAGTT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947473
Expected error %
0.222539
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0069E09
Clone
Clone name
hba-69e9
LE_HBa0069E09
C08HBa0069E09
P069E09
Clone type
BAC
Contamination
none
Estimated length
125,749
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found