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Clone Read LE_HBa0093M16_T7_86239

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0093M16_T7_86239
Primer
T7
ID from Seq. Facility
LE_HBa_093_M16-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 845 raw
Sequence
>LE_HBa0093M16_T7_86239 (raw untrimmed)
GATGGGAAGTGTAAGCACTACTATCACACATTGAGGAGATCTTCATCTGATATACATGAATCTTGCTATATTAATATGGGGCTAGTTTGCGCGTTATACT
ATGATAATGTTCGAATCAATGACTACATACGATTTTCTTGATCTTTATATTCATTAATGAAGTAGAGCTGTGTGTTCCTGACTCATATATACCGACGCAG
AGATGTTCCAAACAACGAATAAGACTAACCATCGAGAACTACTAGACCATGTCTCTTTCATT
TCCCCTATAATTTGGACTATGGACTAGACGAGAAGTTG
TCTCTCTCATGTGACAATGTATTACTCGATTATTAGTCCATAGTTATAGTAGAATTAAAGTCGATGGTTTTCTTTATGTGTCAGTTGTCTGCGACTATAT
CTTCACTAGCTACATTTCTGTATTACACTAACTCTTCTTTTGTGTATATTAAGAGATGACCAATCATTTTTACTACTGACGGCCTCTCCCTCCCTCTCAC
TCCCCCCTTAAATTCTAATCGTCCCTAATGATACATCTATATTTAGAATTGTCTTTTCCCATAATTCTCTATTTTACTGTTTATGTAGTGTCTTCATCTC
ATACTCACTCTTATTATCTCCATTTACTCTAACTCTATCTCGTTCGAACGTGAATTCTATATCCCTTCTGCTTATATCTCTTATATCCGTCTTCATATGA
GCTGCCTCGTGTCACTTTCTCTTGCTTCTGATTCTTTTAGATGCTTGCTCCTATTCATATTACTCCGTCTCCTCACCGCCCCTTATCTCCATTCTTCCAC
AATCAATTCCATTCTTTTTTATCTATATTTTCCTATTCTCTGTGT
>LE_HBa0093M16_T7_86239 (trimmed for quality and cloning vector)
TCC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.1027
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0093M16
Clone
Clone name
hba-93m16
LE_HBa0093M16
P093M16
Clone type
BAC
Contamination
none
Estimated length
181,123
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found