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Clone Read LE_HBa0139D08_SP6_88094

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0139D08_SP6_88094
Primer
SP6
ID from Seq. Facility
LE_HBa_139_D08-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
659 trimmed for vector and quality, 922 raw
Genbank Accession
DU076477
Sequence
>LE_HBa0139D08_SP6_88094 (raw untrimmed)
CAAAGGGTGGGGGGTTTTTTATTTTAGATTTTCGTTTTCATCTTTTTCGTCACAACACTCCAGACTTCATCTCTTTTTAGTTTGACTTTATCTGTGTAAG
GAAAGGATTTTACCGAATGCATCTTGAATTAGTAGTGGTTAGGTATTAATGTAGAAAGGAAAGTGATAGCTTATTCTTCAAGATAATTGAAAGTTCATGA
GAAGAACAGTATTAAGTATATGTTAAACTTGGCAGTGGTGGTGCTTGCATTAAAACTAAAGAGGCATTATATTTATACTGTGTATTGCGGGGTGTTTTAT
TATATTTTTTAATAACAAGAACCTAAATTTAAGACAATGGAGATGGTTAGAATTTCTCAAGGACGATGGAATGACTATCGTTTATCATTTTCGCAAAGTG
AATGTGATAGTATGCCTTAGGTTGAAAAACAGTGAGTATAGGTAGTCTACATTTGGCACAGTAGGAGAGTGGCCAGTGGCTATAGATGTCAAAATCCTTA
GACAACAACTTTGTGAAACTTGATATTTTAAAATTTTGTTTAATTTTCACTTACAGGGAGGTGAGGTAGTTCTTTTTGGATCAGATCCGGGTTCAACAAC
TTGGTGAAGAAAAATTGTATAAGATTTGAGACAAGATGTTATACATAAAATCCGAGGAGGAAATTCATGATGATGAGGGAGTATAAAGGATAAAGGATTT
TATTTATATTCTTCCGTTATGTGAGTTGACTTGATTAATTATGGAAAAAGTCAATAGTTCAAATTTTTTATTCTTTCAAATCCTAATGAGGGGTATTTTA
CATGAACGAGGAGTAGGGTTAAAATCAAATGGAGGGCCAGAATTTGAGCCCGGGTGTGATTGGGAACCCTAAATTTGCTCCACCAACGCTGAGGTATGAT
GTTGATGTAGTTCAATAAGGTC
>LE_HBa0139D08_SP6_88094 (trimmed for quality and cloning vector)
TTTAGATTTTCGTTTTCATCTTTTTCGTCACAACACTCCAGACTTCATCTCTTTTTAGTTTGACTTTATCTGTGTAAGGAAAGGATTTTACCGAATGCAT
CTTGAATTAGTAGTGGTTAGGTATTAATGTAGAAAGGAAAGTGATAGCTTATTCTTCAAGATAATTGAAAGTTCATGAGAAGAACAGTATTAAGTATATG
TTAAACTTGGCAGTGGTGGTGCTTGCATTAAAACTAAAGAGGCATTATATTTATACTGTGTATTGCGGGGTGTTTTATTATATTTTTTAATAACAAGAAC
CTAAATTTAAGACAATGGAGATGGTTAGAATTTCTCAAGGACGATGGAATGACTATCGTTTATCATTTTCGCAAAGTGAATGTGATAGTATGCCTTAGGT
TGAAAAACAGTGAGTATAGGTAGTCTACATTTGGCACAGTAGGAGAGTGGCCAGTGGCTATAGATGTCAAAATCCTTAGACAACAACTTTGTGAAACTTG
ATATTTTAAAATTTTGTTTAATTTTCACTTACAGGGAGGTGAGGTAGTTCTTTTTGGATCAGATCCGGGTTCAACAACTTGGTGAAGAAAAATTGTATAA
GATTTGAGACAAGATGTTATACATAAAATCCGAGGAGGAAATTCATGATGATGAGGGAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.938424
Expected error %
0.499956
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0139D08
Clone
Clone name
hba-139d8
LE_HBa0139D08
P139D08
Clone type
BAC
Contamination
none
Estimated length
116,678
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found