Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Clone Read LE_HBa0139D08_T7_88095

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0139D08_T7_88095
Primer
T7
ID from Seq. Facility
LE_HBa_139_D08-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
742 trimmed for vector and quality, 837 raw
Genbank Accession
DU076478
Sequence
>LE_HBa0139D08_T7_88095 (raw untrimmed)
CATCCCCGGCCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCTGTCCCGACTCTCTCCCCTCTTTTTCTTTTTCTTTTCTTTGCTCCTA
GAGAGAGAGAATTTTTTGAGAGTAATTTGGATTCTTTTGGTGAATGAGTTAAATGATTAGTTTAAGGTCCATTAAGATTATATAGGTGGTTAAATAACCT
ATTATACGACCTACATTAACCCTAAATTAATAATTAACTTAACCCCTAAACATTCAACTAAAACTAAAAGCTAAAAAACTGTCATGACTCACGCCCACCC
CATCCACGGACCGTGGATGGGACTACTGTCTGTAGTTTGGTATCGTGGTAGGGGTGTGAGGCCTAAATATTGCAGGCAACTCAGTCATTGACCCACATAC
ATGACCTACAGGGCGTGGACTAATCTACAGGCCGTATATGGCCATACCTAGGTCACAATTGAAAAACGGTTTATTGTGGACTTTTTTGGGGACTATTTTC
AAGGACCCCTTGGGTGGTCCGTGGGGGTCGTATCTGGATGTTTAACCCCTAAAAATCCTATTCTAATTACAGAAATCATTTTCGCGACTTTTGAACCTCA
TACTATACTCCAAAACTCCATTACAAGACTCTAGAACTCACTAGTTTAACTTTACTAAATTCTGGGGTGTTACATAAACTGGTCCACATGGCAGGTGAAC
GGGATCATATTCACCTTTTTATATGTTTCAAATAATTTCAGGGGATACTATCCTAATCCTTAACTGGTTATAATGATCATTTAATCATGAGAACAAGCAA
GACAAGAGATTTCTTCAACTAAAAATATTTTTTAAAN
>LE_HBa0139D08_T7_88095 (trimmed for quality and cloning vector)
AGCTTCTGTCCCGACTCTCTCCCCTCTTTTTCTTTTTCTTTTCTTTGCTCCTAGAGAGAGAGAATTTTTTGAGAGTAATTTGGATTCTTTTGGTGAATGA
GTTAAATGATTAGTTTAAGGTCCATTAAGATTATATAGGTGGTTAAATAACCTATTATACGACCTACATTAACCCTAAATTAATAATTAACTTAACCCCT
AAACATTCAACTAAAACTAAAAGCTAAAAAACTGTCATGACTCACGCCCACCCCATCCACGGACCGTGGATGGGACTACTGTCTGTAGTTTGGTATCGTG
GTAGGGGTGTGAGGCCTAAATATTGCAGGCAACTCAGTCATTGACCCACATACATGACCTACAGGGCGTGGACTAATCTACAGGCCGTATATGGCCATAC
CTAGGTCACAATTGAAAAACGGTTTATTGTGGACTTTTTTGGGGACTATTTTCAAGGACCCCTTGGGTGGTCCGTGGGGGTCGTATCTGGATGTTTAACC
CCTAAAAATCCTATTCTAATTACAGAAATCATTTTCGCGACTTTTGAACCTCATACTATACTCCAAAACTCCATTACAAGACTCTAGAACTCACTAGTTT
AACTTTACTAAATTCTGGGGTGTTACATAAACTGGTCCACATGGCAGGTGAACGGGATCATATTCACCTTTTTATATGTTTCAAATAATTTCAGGGGATA
CTATCCTAATCCTTAACTGGTTATAATGATCATTTAATCATG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.962266
Expected error %
0.72028
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0139D08
Clone
Clone name
hba-139d8
LE_HBa0139D08
P139D08
Clone type
BAC
Contamination
none
Estimated length
116,678
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found