Clone Read LE_HBa0047H01_SP6_9168

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0047H01_SP6_9168
Primer
SP6
ID from Seq. Facility
LE_HBa_047_H01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
775 trimmed for vector and quality, 883 raw
Genbank Accession
Sequence
>LE_HBa0047H01_SP6_9168 (raw untrimmed)
CCCCCCACCGATGTGTAAGAGAATCTGCTTCATCTGATGGTGAGAGAAGTTCTCTCCTTAGTTCAGATCATAAGGTAGTTCCAGGAAGCCCTCTGGCAGC
AAACTTCTTCTCCTCCAATTGGCAAAAATGTGCCTCTCTACCTGTGACCCCTGCTTCAGATTCATCTCCCTCAGTTTCTACGCCTATATCTTCCAGGACA
CATGGTGAACAACAAAGGTCAAATGTGAGTTCCTTTTGTTCCATTAACGATAATGCGCTTTCAATAATTTCTGAAAAGTTAAACTTCATCAAACAACTCA
GAAGGTGGTTTCTGTTGACACAGAAATAATATTCCCTCTGTTTCATTTGTGTAAACTTGTTTGTCCACCTAGTTTAAGAAGGAGAGACTATTCGAACTAA
TGGTTTCAAACAACCATGACATATTTTGTGGCTATAATGTCATGCCATTAAGGGTTAAATGTGAAGTTTAAAGTTAAATTGTTTTTAAACATAAAAGGGG
TCAATTCTTTTTAAACAAACTAGAAAGGAAAGAATGTCTAATAAAATGGAACAATTCAGACTGTATCCTCAATGTCCTTGAACTTGATTTCACTAATCAG
TCTCCTCTCCACACAACTTATAAATAGACTCAAATCTAATATGATTTTTGATGTAATAATTTTGTTGATAAATATCTGGTCTGGACAAACTTGAACAGAT
AATTCAATGTTTTATATACTACATGTCCATCAAGTTGATCTGTCTATGCTTGCATTAGTCATACTTCGTCAGTTATAATAAGACAGGAATTGTGCCAGAG
AAAAGCACTAAATTTGGAAGCTGGCCTCATTCTGCAGTAGTGCTGTATGTTCAATTGTCTAATGGCCAAGAAGATCTCTTGTC
>LE_HBa0047H01_SP6_9168 (trimmed for quality and cloning vector)
TCTGCTTCATCTGATGGTGAGAGAAGTTCTCTCCTTAGTTCAGATCATAAGGTAGTTCCAGGAAGCCCTCTGGCAGCAAACTTCTTCTCCTCCAATTGGC
AAAAATGTGCCTCTCTACCTGTGACCCCTGCTTCAGATTCATCTCCCTCAGTTTCTACGCCTATATCTTCCAGGACACATGGTGAACAACAAAGGTCAAA
TGTGAGTTCCTTTTGTTCCATTAACGATAATGCGCTTTCAATAATTTCTGAAAAGTTAAACTTCATCAAACAACTCAGAAGGTGGTTTCTGTTGACACAG
AAATAATATTCCCTCTGTTTCATTTGTGTAAACTTGTTTGTCCACCTAGTTTAAGAAGGAGAGACTATTCGAACTAATGGTTTCAAACAACCATGACATA
TTTTGTGGCTATAATGTCATGCCATTAAGGGTTAAATGTGAAGTTTAAAGTTAAATTGTTTTTAAACATAAAAGGGGTCAATTCTTTTTAAACAAACTAG
AAAGGAAAGAATGTCTAATAAAATGGAACAATTCAGACTGTATCCTCAATGTCCTTGAACTTGATTTCACTAATCAGTCTCCTCTCCACACAACTTATAA
ATAGACTCAAATCTAATATGATTTTTGATGTAATAATTTTGTTGATAAATATCTGGTCTGGACAAACTTGAACAGATAATTCAATGTTTTATATACTACA
TGTCCATCAAGTTGATCTGTCTATGCTTGCATTAGTCATACTTCGTCAGTTATAATAAGACAGGAATTGTGCCAG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947147
Expected error %
0.0403397
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0047H01
Clone
Clone name
hba-47h1
LE_HBa0047H01
P047H01
Clone type
BAC
Contamination
none
Estimated length
86,772
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found