Clone Read LE_HBa0029B20_T7_91863

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0029B20_T7_91863
Primer
T7
ID from Seq. Facility
LE_HBa_029_B20-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
247 trimmed for vector and quality, 798 raw
Sequence
>LE_HBa0029B20_T7_91863 (raw untrimmed)
ACCCGGTACCCGGGGGATCTCTAGAGTCGACCTGCAGGCATGCATGATTGTTCTATAGTGTCACGTAAATACCTTGGCGTAGGCATGGGGATAGCTGTTT
CCGGTGTGAAATTGCTATCCGCTCACAATTCCAAATTGCATACGATCCGGAAGCATAAGGTGGAAAGCCTGGGGAGACAAATGAGAGAGCTAACTGACAT
TAATTGCGTTGCGCTCACTGCCCGCTTTACATGCGGGAAACCTGTCGTGCGCGCCTGCATTAATGAATGGGGCAACGCGAACCCCTTGCCGGCACCCGGG
GCAACAACGAAGTCCCATGTACGACCTCTGATCATGCCAATTACTACCGTGCGTCCACACATTAGATCCTGCCTGTGCCTTCCAACGAGTCCTATAAGAG
TACCAAGCTCTGACTTCTCATAAATACTCCCCGACCGGTCCCTCTCCCCAATATCGTTGACACTCACTAACCCTTCAGCTGACACAGAAGCCAACACTCC
CAGCCCGACCCACCCAATATCATAAACCTCCCTATCACCGAGCAATTCACTGGGATATTAACAGCCTCCCGCTCAATATCCCAGAGAATACATGGACTAT
AAAGACTCCACTTACCTCTCCACCGTCTGAAACTCTCCCTTCGATTCGAATAAAGTAAACAGACCGGAACACTCACTCCTTCAGTTAGAAATACAAAGAT
TCCTCCTGTCCACCCCACTATTATCATAGAAAACTCCCCAAACCCGCGAGAAATCCACTAGATGTACCCAACAAGAGCCCGGCTTCAGGGTTCTCCTT
>LE_HBa0029B20_T7_91863 (trimmed for quality and cloning vector)
TGATTGTTCTATAGTGTCACGTAAATACCTTGGCGTAGGCATGGGGATAGCTGTTTCCGGTGTGAAATTGCTATCCGCTCACAATTCCAAATTGCATACG
ATCCGGAAGCATAAGGTGGAAAGCCTGGGGAGACAAATGAGAGAGCTAACTGACATTAATTGCGTTGCGCTCACTGCCCGCTTTACATGCGGGAAACCTG
TCGTGCGCGCCTGCATTAATGAATGGGGCAACGCGAACCCCTTGCCG

This is probably not a useful sequence.

Problems:
  • High predicted error rate
  • Probable foreign DNA contamination
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.944822
Expected error %
4.65776
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0029B20
Clone
Clone name
hba-29b20
LE_HBa0029B20
P029B20
Clone type
BAC
Contamination
none
Estimated length
104,191
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found