Clone Read LE_HBa0129J01_SP6_98352

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0129J01_SP6_98352
Primer
SP6
ID from Seq. Facility
LE_HBa_129_J01-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
515 trimmed for vector and quality, 962 raw
Genbank Accession
DU056646
Sequence
>LE_HBa0129J01_SP6_98352 (raw untrimmed)
GGCCGGCTTCCTGTTCGCTTCTGTTTTATCTAGCGTATTACGTCCAAATGCTAGTTGTATAATTTTGGTTGTGACTGGAAAAATGTGTGCTTGGTAATGT
ATGACAAGACTATGGCTCGTAATAATGTATCCTCTGCATAATATTCTGATTTTTGTCATGTTTAGTTCTATAAGAATAATATAATGCTGGCATGTGATGA
ATTTAAATGTAGAAACCTGATAGGTGAGAATTTATATAGCTGATCCCAACTTGTATGAGAAGGTATATATGTGTTGTTGCTTCCCACAACAATGACATAT
GATTTTGTTGGACCTTGTGATAAACCTGTTTTCCTTGTTGGTAGCTAAAACCGGTTAATGGACTTTACCTTGGCAGATTTGGAGTATGCTTGTAGAGTAT
TCTCTCACAAGCCTGGATTTTAAACAATTTACTGAAAATGGCAACTGGTGGGTTGCTTTACTACTTTGTTCGAGGTGGAAGACAGGACGCAAGAGCTGTT
AAATATATTCGAGTTAATGTATTTCTCTAGCTCCAAAGGGTGCACGGTTTTGCATAATTTGCTCTTGAAGTGCCACTGCTAATGCATTAGCTCGAACGCT
TCTTTTTCTATTTTACTTTGTCGATGATCTTCATACAAAAGAGTCGTTTGCACTAAAGGGATTTGGCAGTCACTTATCATACAAACTTGAGCCTTTATAG
TCAGTGTAATTGCTAGGAAGTTACTAGTACCTGGTCTCTAAGGGGCAAGCAAAGTCTCCCAAAACCACATCCCTACAATTAAAAACATAGAATTTCTGAC
CGCCACAAATTCTTCTTACTAGTCCTGCAATAGAAAAATTACTTTTAAATAACCGAAGAATCTGACAACAATACAAGAGTTAAATCTCTTAAGCATAGGA
TACTTTAAAACTAATTTTTGATATCAGATAACAAAAAATTCCTGTAAGATGTTCTGAATGAA
>LE_HBa0129J01_SP6_98352 (trimmed for quality and cloning vector)
TTGGTTGTGACTGGAAAAATGTGTGCTTGGTAATGTATGACAAGACTATGGCTCGTAATAATGTATCCTCTGCATAATATTCTGATTTTTGTCATGTTTA
GTTCTATAAGAATAATATAATGCTGGCATGTGATGAATTTAAATGTAGAAACCTGATAGGTGAGAATTTATATAGCTGATCCCAACTTGTATGAGAAGGT
ATATATGTGTTGTTGCTTCCCACAACAATGACATATGATTTTGTTGGACCTTGTGATAAACCTGTTTTCCTTGTTGGTAGCTAAAACCGGTTAATGGACT
TTACCTTGGCAGATTTGGAGTATGCTTGTAGAGTATTCTCTCACAAGCCTGGATTTTAAACAATTTACTGAAAATGGCAACTGGTGGGTTGCTTTACTAC
TTTGTTCGAGGTGGAAGACAGGACGCAAGAGCTGTTAAATATATTCGAGTTAATGTATTTCTCTAGCTCCAAAGGGTGCACGGTTTTGCATAATTTGCTC
TTGAAGTGCCACTGC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.953596
Expected error %
0.485661
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0129J01
Clone
Clone name
hba-129j1
LE_HBa0129J01
P129J01
Clone type
BAC
Contamination
none
Estimated length
72,623
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found