Clone Read LE_HBa0141B13_SP6_99528

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0141B13_SP6_99528
Primer
SP6
ID from Seq. Facility
LE_HBa_141_B13-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
13 trimmed for vector and quality, 792 raw
Sequence
>LE_HBa0141B13_SP6_99528 (raw untrimmed)
TTTATTTTTAGCTAGCATCCCCTTTCTATAAGGANGTNCTAGCGATGGATACCTTTTGAGTCATAGGGGCCTTTTTTAAGGCAGCTTGGTCAAGCTTCAT
GTTTCATTGAGGANGA
AATAACCTTCAAGGTAAACATGCAAGAAACATCAGTCAGTTTTACCATATCCTAGGTTCTCCGACAATCTGCCTATCCTCCAAT
TTGCCACTTCGCGCACCTGTCCAGCTCTTCACATCCACTCCGGCTCGCCCATGCTTACGCCCTTCTACCTGTCCAGTACTACCCCTCATACTCTCCCTTT
ATCAGCTAGCTTGTTCGATCTGCTATCCGGTGAGCTCTTATGTTCCGCGCTGCCCTAACCAGCTCCCGTGCCTTGTCCATCTCTTCTTCACACGCCTCTA
CGCAGCCCGCTCTCCCATCCCATTCCCTAGTCTCGCCCCCGGCGTAGCACTCTCAACTACACTGATACCTATATCACATACCTGCCTCTCTTCACTCATG
CCTTATCCATCATATCATCTCACATCCTCCACTCACCCCTATTACATCCCACTAGCCTCCCCGCTGCGTCCGCCTGCTCGCTACCCTCCCGGTTGTTCGT
CACCACTCTCTCTTGACCCACAACCCCTCCTTCTCATCCCCCTCCTCACCTCAGCTCCTTGACCGGTCGCATGGCAATGCCTGCTGTTCTTCGTCTCCAT
CTCTCACTCCTCTACACTTTCTTGCCAATGGCGCTTCTTGTACTTGTGCTCTTCCTTTCGCTCTGCACTCACGTATTTCTTCCGTCGCTGCC
>LE_HBa0141B13_SP6_99528 (trimmed for quality and cloning vector)
AATAACCTTCAAG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.579064
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0141B13
Clone
Clone name
hba-141b13
LE_HBa0141B13
C03HBa0141B13
P141B13
Clone type
BAC
Contamination
none
Estimated length
82,576
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found