SGN Gene Family 101617
| Summary |
| Family Number | 258 |
|---|---|
| Total Genes | 57 |
| Build Date | 2007-08-28 |
| i Value | 1.1 (Low stringency in grouping genes together) |
| Build | 4 [Details of the Overall Family Build] |
| Annotation | PSP, proline-rich; Ubiquitin;Biological Process: protein modification (GO:0006464); Nucleotide-binding, alpha-beta plait;Molecular Function: nucleotide binding (GO:0000166); Cyclin-like F-box; Protein of unknown function DUF382;Cellular Component: nucleus (GO:0005634), Biological Process: mRNA processing (GO:0006397); UL92; RNA-binding region RNP-1 (RNA recognition motif);Molecular Function: nucleic acid binding (GO:0003676); Protein of unknown function DUF701, zinc-binding putative |
| Data Set | Gene family for all current cgn unigene builds and the Arabidopsis proteome version 2004 |
| Explanation of family analysis and terms used on this page | |
| Relations to Other Builds |
| Build id | i Value | Family Number (Size) |
|---|---|---|
| 5 | 2 | 2898(7) 1846(10) 3767(5) 5614(4) 2144(8) 5471(4) 6708(3) 9568(2) 3273(6) |
| 6 | 5 | 2608(7) 1863(9) 6729(3) 6847(3) 1897(8) 5118(4) 10414(2) 10651(2) |
| Family Sequence Alignment |
| Alignment not available for this family. |
 Family Members
|
Family Members| Organism | # of Members | Member Id |
|---|---|---|
| Arabidopsis | 17 | At1G02450 At1G09415 At1G11520 At1G21560 At1G60640 At1G77270 At2G32360 At3G07730 At4G01170 At4G01895 At4G21660 At5G03710 At5G45360 At5G46030 At5G47090 At5G55430 At5G58130 |
| Solanum tuberosum | 20 | SGN-U269173 SGN-U269174 SGN-U275369 SGN-U277034 SGN-U277207 SGN-U277925 SGN-U278631 SGN-U279884 SGN-U280539 SGN-U282436 SGN-U282478 SGN-U283599 SGN-U283738 SGN-U284824 SGN-U287241 SGN-U287242 SGN-U287244 SGN-U289562 SGN-U295277 SGN-U295525 |
| Solanum melongena | 1 | SGN-U206931 |
| Capsicum annuum | 6 | SGN-U198641 SGN-U199222 SGN-U200460 SGN-U200583 SGN-U203337 SGN-U203871 |
| Tomato 200607 | 13 | SGN-U314004 SGN-U314005 SGN-U319908 SGN-U319909 SGN-U319910 SGN-U320131 SGN-U320697 SGN-U323704 SGN-U325842 SGN-U328608 SGN-U334716 SGN-U334717 SGN-U341398 |
Working
