Sol Genomics Network

This unigene is from an out-of-date build, Tomato 200607 #1
It has been split into SGN-U578819 and SGN-U589844 in the current build, Tomato 200607 #2

Unigene SGN-U315466

Unigene Basic Information

Unigene ID:	SGN-U315466
Unigene Build:	Tomato 200607 #1
Date:	2006-07-27
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	315466
mRNA sequence:	Length: 1896 bp

>SGN-U315466 Tomato 200607 #1 (29 members)
CAAAATTTGAAAGAGGAGAGAGAGAGGAAGAGAAATGAACAAGTTATAGGGGGAGAGAGAAAAAATCAAAAGAGGAATAGCTGGATTCAC
ATGGCTGATTTACTAATGGGTCCTCTTTTTCTCTCTCTCTTCACCTAACCGACAATTATGATCTTTGAATCTTAAACTAAGAAGAAAAGA
ATTGTTCTTCTTCTTCCTCATTGTAATATTTCTGTTTATCCCCTTTTCTCTGTTGATTTTGAGCTGGACAAGTAATGGCTGATGATAAGG
AGATGTCAGCTCCTGTTATGGATGGGAATGATGCAGTCACTGGTCATATAATTTCCACAACCATTGGAGGCAAGAATGGCGAGCCAAAGC
AGACAGTTAGTTACATGGCTGAACGTGTTGTGGGGACTGGATCGTTTGGGATTGTCTTTCAGGCAAAATGCCTGGAAAATGGGGAGACTG
TGGCAATAAAGAAGGTTCTGCAAGACCGTAGATACAAGAATCGTGAGTTGCAGCTAATGCGCACTATGGATCACACAAATGTTGTTTGCC
TAAAGCACTGCTTCTATTCAACTACGAGTACAAATGAACTTTTTCTCAATCTAGTCATGGAATATGTTCCAGAAACTATGTATAGAGTGC
TAAAGCATTATAGCAATATGAACCAGAGAATGCCACTCATCTATGTTAAGCTTTACACCTATCAAGTATTTAGAGGGCTGGCTTACATGC
ATACTGTTGCTGGCGTATGCCACAGGGACTTGAAGCCTCAGAATGTTTTGGTAGACCCTCTTACTCACCAAGTAAAGATTTGCGATTTTG
GAAGCGCGAAAGTGCTGGTTAAAGGAGAAGCTAACATCTCATACATCTGCTCGCGGTTTTATCGGGCTCCTGAGCTCATATTTGGTGCAA
CAGAGTATACTACTTCAATTGATATCTGGTCAGCTGGCTGTGTCCTTGCTGAGCTTCTTCTTGGCCAGCCATTGTTCCCTGGAGAAAATG
CTGTGGACCAGCTTGTTGAGATAATCAAGGTACTTGGAACACCGACAAGGGAGGAAATTCGCTGTATGAATCCAAACTATACTGATTTTA
GGTTTCCACAAATCAAAGCACACCCTTGGCATAAGGTTTTCCACAAACGGATGCCTCCTGAAGCAATTGACCTTGCTTCTCGGCTACTGC
AGTACTCACCAAGTCTACGTTGCACTGCACTTGAAGCATGTGCTCATCCTTTCTTTGATGAACTTCGTGAACCAAATGCACGGCTTCCCA
ATGGTCGCCCATTGCCCCCTCTCTTCAATTTTAAGCAGGAGTTATCTGGTGCCTCTCCGGACCTCGTAAACAGGTTGATACCAGACCATA
TAAAAAGACAGATGGGCCTGCATCTTTTTGCATCCCACGGCGACATGACGTGAAGTATATGTTTAGTGAAGTATACTAGTTTATGATCTA
TATATGAAGGGATCCAAGTGACACCCCTTCCAGAGCAGAGGAGTCCAGCATGACAGCGACAGTATATCCTGGTCGAAAAGGACAATGTAA
TGGGGCTGCAGTGCATTTTAGTTCTGTACTTTGTATTATCTTTTTTGTTCCACTCTTCAAAGTCTTCCCATCTTAGTAGCCAACTAGTGA
AAAGGAAATATGTTTTTGTACATGTTTGTTAGTAGTAAATTGACCAGAAAGCTTCCGGGGACACGTTTGAATATGTATGGACAAGTTGCA
AGGCTCCAAAAGGATTGCCAGGACTTGAAAGGGCAGTATTTTTTTTTCCCGTAAGTTTATATCTCACTTCAGTTTGTATTTAGCAGTCTA
CTTTGAAAAGAGTTGCGAGCAAATTTGTGTTACAGTTGCTCTATGTGATTATGATCAATCAAACGTATCTATTTTGTTGAAAAAAAAAAA
AAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (13)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	4
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	5
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	5
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	cTOS	suspension cultures	8026	2
Solanum lycopersicum	cTSB	seed	1880	2

mRNA member sequences (29)

To view details for a particular member sequence, click the SGN-E# identifier.
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Markers Information (0)

Expression Data (2)

Annotations (manual: 3 | blast: 2 | go: 5 )

Protein prediction analysis (2)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.1	101361	Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Protein kinase-like	1515
2	118420	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468)	253
5	129072	Protein kinase-like Protein kinase - Molecular Function: protein kinase activity (GO:0004672) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Molecular Function: ATP binding (GO:0005524) - Biological Process: protein amino acid phosphorylation (GO:0006468) Serine/threonine protein kinase active site - Molecular Function: protein serine/threonine kinase activity (GO:0004674) - Biological Process: protein amino acid phosphorylation (GO:0006468)	47

Preceding Unigenes (1)

Unigene	Build
SGN-U214656	Lycopersicon Combined #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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