Sol Genomics Network

Unigene SGN-U583990

Unigene Basic Information

Unigene ID:	SGN-U583990
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1434 bp

>SGN-U583990 Tomato 200607 #2 (33 members)
GGGCAAATGGCAACTCTGCGCTGCTTATAAATAGAGAGGGTTGGGTTAATGCCTTCTTCAAAAACTAAACTCCCTGAAAATTCCCAAAAG
CAACTGTAATCACTATGTCATCCCTTAACTTTTCAGACGGTATCGATAAATTTTCCGGCGAAATGTCTGAGGTTGATATCCAAATCGTCA
CCTCCGGCGGCCTCCGCATTCCGGCACATTCCGCCGTTCTGGCTGCTGCTTCGACGGTTCTGGAGAACATACTAGCTCGGCCGGGAAAGC
GGCGGAGCTCCGAGAGAACGATTCGGATTCTTGGCGTGCCGTGCGACGCCGTTTCCGTGTTTATCCGGTTTCTCTATTCTTTCAAGTGCA
CTGAAGAGCAGATGAAGAGACATGGGATCCATCTGCTAGCACTTTCTCATGTGTACTTGGTACCGCAGCTGAAACAGAGATGCACAAAGG
GGTTGGCCGAGCGATTGACGATTGAGAATGCTGTGGATTTGCTTCAACTTGCGAGACTATGTGATGCACCAGATCTATATCTTAAGAGTA
TGAAATTTTTGTCTAGTAATTTCAAGAAAGTTGAGGAGACTGAGGGCTGGAAATTCCTTCAACATCATGATCCCTGGCTTGAACTTGAAA
TTCTACAGTTCATGGATGAGGCTGAGTTGCGGAAGAAGAGGACAAGGAGACACAAACTAGAGCGGAGCTTGTATTTACAGCTAAGCGAAG
CGATGGATTGTTTGGAGCACATTTGCACTGAAGGATGTACTAGTGTGGGGCCATTAGATAAAGAACCTTCCATCAAGAGGCAGCCATGTA
GCAAGTTTGATACCTGCCAAGGGCTTCAGTTTCTGATTCGACATTTTGCTACTTGTAAGAGAAGGACCAATGGAGGTTGTTTGCGATGCA
AGCGCATGTGGCAGATCCTAAGATTACACGCATCCATTTGTGACCAACCAAACGATTGCCAGGTTCCCCTTTGCAGACAATTCAAATTGA
AGGTGCAACAAAAGGGTGATGACGAGCTGTGGAAATCACTTGTTAGAAAGGTAGTGTCAGCCAGGGCAATGTCTTCTTTATCTCTGCCCA
AAAGAAAGAGAGAAGAGGAACCGAAAATGGACTTTAACCATCATCAAGTGATGAACTTCAGATTGGCAGCTTAGTGTCAAAAGTGTGTGT
TTCATATCGTAAGGCGAACTCGATCTTTGTAAATAGACCATCAATAGAATGTAATTTAGTTTTTACCATTTCATATTTCCTACTGTAGAG
ACCTATTCTATATGTTTATTTATTATTTCTGAGTCAGTCTTTTAGTAGATGAAGAGTGTTGTATCAGCAAAAGAGTTGTATACAAAAAGA
GTAATTCTACAACTACTGTGTGGTAGTCTCTGTATATATATCTTCATTTTGTGTAATAAAATTAGCCAACTATATGCTTCATAT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc06g071820	Solyc06g071820

Genomic locations (0)

None

Library representation (16)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	6
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	3
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	LA	Leaf Mature leaves	6589	1
Solanum lycopersicum	LC	Leaf Mature leaves	5712	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	4
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLER	leaf 4 weeks	5127	3
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	2

mRNA member sequences (33)

Alignment image suppressed for unigene with 33 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U315867	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
Project Name:
Start Date:
End Date:
Event Type:
Event Description:
Event Web URL: