Sol Genomics Network

Unigene SGN-U581531

Unigene Basic Information

Unigene ID:	SGN-U581531
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 2885 bp

>SGN-U581531 Tomato 200607 #2 (51 members)
AAAAAAAAAAAAAAAACCATTCTTTCTTTGTTCTCTCTTTAACCTCAATCTTTCTTTCTCTCTCTATTTTTTGCCCTACTCTGTTGGGGT
TCTTTAAAAATCTGTATTTTTGAGGGTTCTTGAAAAAAAATTGGATTTTTTCATCTGGAATGCGAATCTTGGTTAAGGATATAATCTGGG
TTGTGTTTTTCTTGGTTCAAAATCTGATCTTTTTTGCTTTACAGTTTGGGATTGAAGAACAATCATGCCTACTCTTGTTAATTACAGTGG
TGATGATGAGTTCTACTCTGGTGGATCGTTTTGTTCTGCAGATTTGGGTCTCATGTTGTCTTTGGGTCATGCTGATGTTTACTGTCCTCC
TAGGAAGAGGGCTAGAATTAGTGGCCCGTTTGTTGTCGAAGACCGATCAAAGGATCCATCTCTTGAGGTTCTTCCTGATGAATGCCTATT
TGAGATCCTCAGACGATTGCCTGGAGGCCGAGAAAGGGGTGCAGCAGCTTGTGTTTCTAAGCGCTGGCTTACAGTGTTGAGTAGCGTGAA
AAACTCTGAAATTTGCAGGAGCAAGAGCTATAACAATCTAAATGACGCTATAATGATCTCTAAAGATGAAGATCTTGAAGTTGAATGTGA
TGGATACCTTACCAGGTGTGTGGAAGGGAAGAAAGCTACTGATATTAGACTTGCTGCAATTGCAGTTGGGACGTCTACCCGTGGTGGACT
AGGAAAGCTTTCTATTCGAGGGAGTAACTCAGTTCGTGGTATTACTAATGTCGGTCTATCTGCTGTTGCACATGGGTGTCCTTCTCTTAG
GGTCCTATCATTGTGGAATGTTCCTTCTATCGGAGATGAAGGTCTCTTGGAGGTTGCAAGAGAATGCCATTCATTAGAAAAGCTAGATCT
GAGCCACTGTCGTTCAATCTCCAACAAGGGTCTTGTTGCAATAGCAGAGAATTGCCCTAGCTTGACTTCATTGACTATTGAATCCTGTCC
AAATATTGGAAACGAAGGCTTGCAAGCTGTTGGAAAATACTGCACCAAACTACAGTCTCTTACAATTAAGGACTGCCCGCTTGTCGGAGA
TCAGGGAGTTGCTAGTCTTCTGTCATCAGGTGCTTCAATGTTAACAAAAGTGAAACTACATGGTCTAAACATTACCGATTTCTCGCTTGC
TGTCATTGGTCACTACGGCAAGCTGATTACCAGTCTTAATCTTTGTTCACTTCGTAATGTGAGTCAGAAGGGATTTTGGGTCATGGGTAA
TGCTCAAGGCCTCCAGTCTTTGGTTTCTTTGACAATCACCTTATGCCAGGGAGCCACTGATGTCGGTCTTGAAGCTGTGGGAAAGGGATG
CCCAAATCTCAAATATATGTGCATTCGCAAGTGTTGCTTTGTTTCTGACGGTGGTCTTGTTGCTTTCGCTAAAGAGGCTGGATCTCTCGA
GAGTTTAATCTTGGAGGAGTGCAACAGAATTACCCAAGTAGGTATCCTTAATGCAGTTTCAAACTGCAGGAAGTTAAAGTCTCTTTCCCT
AGTGAAGTGCATGGGAATCAAGGATCTAGCTCTACAAACTTCCATGCTGTCTCCATGTGAATCTCTTCGGTCCTTGTCTATCCGAAGCTG
TCCAGGATTCGGGAGCAGTAGCTTAGCTATGGTTGGTAAGCTCTGCCCCAAGCTGCATCAATTAGATCTCAGTGGGCTTTGTGGAATAAC
CGATGCTGGTCTTCTCCCACTCTTGGAGAACTGTGAAGGACTTGTTAAGGTGAACCTTAGCGACTGCCTGAACTTGACAGACCAAGTGGT
GCTTTCATTGGCTATGCGACATGGCGAGACCCTTGAATTGTTGAATCTCGACGGATGCAGGAAGGTTACCGATGCAAGTTTAGTGGCAAT
TGCAGATTATTGCCCATTACTTATTGATCTTGATGTTTCTAAGAGTGCAATAACTGATTCTGGTGTAGCTGCTTTATCCCGTGGAGTGCA
AGTGAATTTGCAGGTCCTTTCCTTATCAGGTTGCTCCATGGTATCGAACAAGAGTGTCCTTTCTCTTAAAAAGTTAGGAGAGAATCTACT
CGGCTTGAATCTCCAGCATTGCTCCGTTAGTTGCAGCTCAGTCGAGCTTCTTGTGGAGGCTTTGTGGAGGTGTGACATCCTCTCCTAAAC
CCACAAAGGGCACAAGGAAATGCATTCGAAATGGTCAAAACGAATAAGCAGAAAGCTAAATTGGTTCATTCAGCCTGGCAATTACAGAAG
CAAACATGAGTGTTCTTTTTTTAGCCCGTATATATTCGTGGCTATCTAATACTTCAGTGTCTCGGTTGTTTTCCAGGACGCTATGGCATA
CATCTTTTTCCCACCATTTTTTGCAGGGCTTCGTCAAATCGAAACCCTGTTTCAGCCATTTTTGGAGACTTACCTCCATCATGCCATGGT
CTCCTGAGAATACAGTCACCTAGTACTGAGATTAAAATTTTCACTCATGCTGCTCCTCGAGAGCCAGGCGGTTTGAATCATTCAGCTAAA
ACTGCGATAGACAAGATTCATCGCGCATTTGCCTCTTTTGTGCTTAGCTACATTGCAGGAATCAGACACTAGTTGTGTAGTTTTTTTTCA
TGTTCAAGAGTCTTTAGTGTTTTCACTGTAAGTATTCTATTATGTGTCTTTTAGTCTTTAGTTGCTTTGAGCAAATTTCTGTTGTTGTGG
TGCCTGTTATTCCCAGGGGCTTGGCCATTACAACCTTATATAGGTTGTTTTTTTAACCAGTCCCTAGTTTTTTGATAGGATTATCAATGT
CCTATTTTTTTACCAGGTTCCATATATTCAGATTTGTACTCCTTGCCGCTATGTTTTTTTTTTCTATATATAATGAAGTAATAGTTTGTT
TTCTT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
EBF1	EIN3-binding F-box protein 1

Genomic locations (0)

None

Library representation (19)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	6
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	LE12	Fruit 12 days post anthesis	276	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	1
Solanum lycopersicum	LePU	Pericarp Turning stage of fruit ripening.	1542	1
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	LeWCAD	Seedling Two-week-old seedings	227	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	10
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	6
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	5
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLER	leaf 4 weeks	5127	2
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	3
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	2
Solanum lycopersicum	vSlycmRNA		8362	2
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (51)

Alignment image suppressed for unigene with 51 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 2 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U315243	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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