Sol Genomics Network

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Unigene SGN-U577434

Unigene Basic Information

Unigene ID:	SGN-U577434
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1413 bp

>SGN-U577434 Tomato 200607 #2 (78 members)
TTTTCCTCTTTATATCCCTTCCATTTCCTTCATTTTTTTTCTTCTAACTATCCCTAAAGCAACTTCACTTGCTCTCTCCTACTTCTTTCT
TAGCAACTTTCCCCCTTCATAAATCCATTTATATGCTCACACACACACATATTTCACAAAATTAATTACCAATTTTGTCATCATTGAAGT
TTCACAAAATGGAGAAAGTTAAAAGTATGGAGAAAAAGAAATTGATTAATGAGTTAACACAAGGGAAGGAATTTGTAAACCAATTGAAAA
ATCAGATAATTGGTCCATTAGCTTCTCCTGAGGAATGTGATTTACTAATTGGGAAAATATTGTCTACACTTGAAAAATCATTATCAATTC
TCAATTTGAAGGCTCTTCTTCTTGAAGGTGGAATTAATAATATTAACAATTCTACATCTTCATGTTCATCGATTTCATTTCTTGGTAGTA
GTAATAATAATATTAGTCCCAAGAGTGAAGTTTTTGATTCTTCAAGGGAAAAATTGGACAAAAATATGGTCTCCAAGAAAAGAAAGAAAA
CACAACAATGGATTAATCAAACAAGCATTTCTGTAAATGGGCTTGAAGGTCCATGTGAAGATGGATTTAGTTGGAGAAAATATGGCCAAA
AAGATATTTTAGGGGCTAGTCATCCAAGGGCTTATTATAGGTGTACTCATAGGAACACACAGGGGTGTTTGGCTACAAAACAAGTCCAAA
AATCAGATGCAAATTCAACAATTTTTGAAGTGACATATAAAGGAAGGCACAGTTGCAAAGTTGCACAATCTGAAATATTTTCACTTAATA
ACCAAAAACGCCAGAAATGCAACAAAAAACAACAAGAAGAAATGGTAATATTCAACTCTGCAACACCAAACCATAACGCTGAAAACTTTA
ACATTATAACAGCAAAAGATGAAGAGGTTTTCACGGCGTTCCCATTCCCTCCTGCACCACTACACATCGAAAATATTATCGAAGAAAATA
AATTCTTTCCAGATTCGTCAGAGTTACCATTATACTTGGCGTCCCCAAATGATGAATTTGGAATGGAACACATGATTCTACAGAGCTCAG
ATTCAGATCTTACTGAATTGATATCAACTCCGACTTCGATTTCAAATTCCTCATTTGGTGGAGAAGGGGTGGATTATGAACCTGAAATCA
CATTTGACATTGAAGAATTCTTCATTTAATTTGAAATTTAGAGAATTCATTGCAAGTTTGTAATAGCAGGAAGTAAGTTTTGTGCAATAA
TTTTTGTTGTTATTTTTAGCCTAATTGATCCTAAGCTAAAGTCAATTGACTGATGTTTAAGAGAAATAGTTGTAGTAAAATTGTAACGTC
GATGAATTCATGTTTGTAATTACAAGCTTTCGCTATTGAAATTCAAGTTGCATTTCCATTTTT

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
SlWRKY41	WRKY transcription factor 41

Genomic locations (0)

None

Library representation (13)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	1
Solanum lycopersicum	LeMiToLf01	leaf	30679	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	17
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	43
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	2
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1

mRNA member sequences (78)

Alignment image suppressed for unigene with 78 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (7)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U312613	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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