Sol Genomics Network

Unigene SGN-U570111

Unigene Basic Information

Unigene ID:	SGN-U570111
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1403 bp

>SGN-U570111 Tomato 200607 #2 (51 members)
CCGGGGGACGTGAAATATAATAAGATGGACAATTATTTTAGAGAGAAGGAGAGAGATAACAAGCTCGGCCAAAAATAAATAGTTATTATA
CTAACAAAATTCTATTTTTAGGTATAGGAAAAATTCATCTGTATATACCGTAATTTTCCATTATAAAAGGGGTATTTTATCTTTTGAAAT
TTGAAGAGAGATAGACATTTACAGGCTTCAAATAAATTTCATCAATGGCGTCGTTGGTGAGGAGAAGATTTTATTCGAGTGAAGCATCAT
TTGTTCAGAGGCTAAGAGATCTGCCAAAGTACCTTCCTGGTACCAAAATCAAAACTCAAGTTTCTCAACTCATTGGGAAAACACCATTGG
TGTATCTAAACAAAGTGAGTGAAGGATGTGGTGCTTATATTGCTGTTAAACAAGAAATGATGCAACCTACTTCTAGTATCAAAGATAGAC
CAGCATTTGCTATGATCAATGATGCAGAAAAGAAAGGATTAATCACCCCTGGAAAAACAACACTAATCGAGCCAACATCAGGGAATATGG
GAATAAGTATGGCATTTATGGCTGCCATGAAAGGCTACAAAATGATTTTGACAATGCCATCGTATACAAGCTTGGAGAGGAGGGTAACCA
TGAGAGCATTTGGAGCTGATTTAGTGATCACTGATCCAACTAAAGGAATGGGAGGAACTATTAAGAAAGCTTACGATCTTTTGGAATCTA
CACCTAATGCTTATATGCTTCAACAATTCTCCAATCCTGCCAATACTCAAGTTCATTTTGAGACTACTGGCCCTGAAATCTGGGAAGATA
CTCAAGGTAATGTTGACATCTTTGTCATGGGAATAGGAAGTGGAGGCACAGTCTCTGGTGTTGGACAATATCTGAAATCGAAAAATCCTA
ATGTCAAGATATATGGAATCGAGCCAGCTGAAAGCAATGTATTGAATGGTGGAAAACCAGGTCCTCATGAAATAACTGGCAATGGGGTTG
GATTCAAGCCGGATATCCTTGACATGGATGTAATGGAAGAAGTTCTGATGGTTTCAAGTGAAGAATCGGTAAACATGGCTAGGGAGTTGG
CATTGAAGGAAGGCCTTATGGTTGGTATATCATCAGGAGCAAATACTGTAGCCGCACTTAGACTCGCCAACAGACCAGAAAATAAAGGAA
AACTCATAGTGACAATTCATCCAAGTTTTGGAGAGAGGTACTTGTCATCTGTTCTGTATGAAGATCTCAGGAAAGAGGCACAAAACATGC
AACCTGTATCAGTTGATTAGTGTTCAATTATTATAGTGATAGTACTAGTGAAACTAGTACAAGAAAAAAAAATGTATGTGCTACATTTTC
TGAAATAATGTTTATGCTTTAAATAATAATGGAAAGTAATCTTTTCTGAACGG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc10g012370	Solyc10g012370

Genomic locations (0)

None

Library representation (18)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	1
Solanum lycopersicum	Le2TR	roots 1-,2-,3-, and 4- month-old	1179	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	5
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	6
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	2
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	3
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	17
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	2
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	2
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTSC	seed	2256	2
Solanum lycopersicum	vSlycmRNA		8362	2

mRNA member sequences (51)

Alignment image suppressed for unigene with 51 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (3)

Annotations (manual: 2 | blast: 3 | go: 4 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U314203	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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