Sol Genomics Network

Unigene SGN-U578798

Unigene Basic Information

Unigene ID:	SGN-U578798
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1539 bp

>SGN-U578798 Tomato 200607 #2 (48 members)
TTCTATTCCGGAAGCTCGTAGCATTGGTCCCGATAAACCCATGAAAAAAAATACATTCTTCTTCTCAGTTGATAAAGCCCAATTAAGGAA
CAATAAACAACCAAAAAAGATGTCATCAATGATCAAATTACCATCTTGCATGTTAAGTGTCAATTCATCTTCTTTTTCAATCAAATCATC
AATTTTTCCAAAATCCATCTCTTTCTCCTCTAGCCATATTAATAATTTCAAGAACCCTTTTTTGAACTCTAAAACTCCAATGGAAAATCA
GAGTTTTTCAATGTTATCTGCTTCTAAACCTCAAAATGGAGCTGTAATTCAAGATTCTTCTTTTCAGGGAAGTGAATCATTCTTCAGGAG
TGTGTTGGGGAACATGGAAGCCATATATCTGAATAAAAACCCCACTGCTAAGGCTATTTTGGAGCTCGTTCGTTCTGCTGATGATGATCA
AATTTGCTATGATCATTTTGCATTTAGGACATTTGGGGTAAATGGTCATGGCATTGATTCTATGTCAAAGTTCTTCTTAGATTTTGGTTA
CGAACGACGAGAGGAGCTGAGATTCCCTGCTAAGAAGTTGAAAGCTTTCTGGTTTTCTCCTCCGAAGGTATCAACTTCCAGTCGTGGGAG
TGGGGTTCACGGGCCATTGCCAAGAATATTTATATCCGAACTTCTTGTTGATCAGCTTAGTCCAGAAGCTCAGGAAATAATCAAAAAGTA
CACTAATATTTCGCACTGTGGAAAAGAATATGCTGCACTTGCAAGTGCATTTGGGATTTTGACATGGGAAAAACCCTCGTATTCGGAATT
TCAACTACTGGCTAGGGAGAGTGAGTATGCTGCCTGGACACTTGTCAATGGATATGCATTGAATCATGTTACCATATCTACCCATCGGTT
GGCATCAAATCTGAGAAGCATTGGAAATCTAAATCAATTTATCGAAGAAAATGGTTTCAATTTGAACTCTGAAGGGGGTTTTCTAAAGGT
GAGCCCTGATGGTCTTTTGCTGCAAAGTTCAACTGTAGCAGATTCTACCTTTTTCGAATTTTCAGACGGCATTACAGAAGCAGTACCTTG
TTCATACATTGAATTTGCTGAGAGACTTGTACTACCGCAATATAAAGATTTACCAGCAGAAAAGGTGGAGGAGTTTCACAGGCGGGACGG
GTTTGAAGTTGGAAATGCCGACAAGATATTTGAGAGTACATCCAAGGATCAGTTAACTCGTCGTGCTGCATGAAAGTAAGCGCGAAGCAG
TTGGATGTTTCGACTCTGTGGAGCTAATTCTTGGCATGTTCAGCTGGATGACTACTCCAAGATTAAACTGTTGTTGAAAGAAGATGATAT
TGTAGCTCTGAAAGTATTATTATCTGTAACTATCACAAATTTACTCTTGGCATATACACCTGATATATCAATAAATTAGTTTGGATGATA
AAGTAGATAGATGGACTAATTAAACACCAATATTGATGTAGTCAGTGCAAAAATAAACTTGTCAATGCTATCCATCTTATGATTTCTCTC
GAAAAAAAA

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc05g007060	Solyc05g007060

Genomic locations (0)

None

Library representation (15)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FB	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	6270	1
Solanum lycopersicum	FC	Fruit Mixture of mature green, light green, breaker, turning, light red, and red ripe stages	8046	2
Solanum lycopersicum	LeMiToFr02	fruit	18697	4
Solanum lycopersicum	LeMiToLf01	leaf	30679	3
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	6
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	6
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	3
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	9
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	3
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	4
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	vSlycmRNA		8362	3

mRNA member sequences (48)

Alignment image suppressed for unigene with 48 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (7)

Annotations (manual: 0 | blast: 2 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U312533	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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