Sol Genomics Network

Unigene SGN-U578804

Unigene Basic Information

Unigene ID:	SGN-U578804
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1567 bp

>SGN-U578804 Tomato 200607 #2 (21 members)
CGAGGGTTGGTTTGTTGCATCATTTGATTATTAACCTCTTCTACCCCTTAACCAAAAGTCCAAAAATCCTTCATTTTTAATTTTATTTTT
TCTTGTATGAATTAAACAAGATTATTATGTCAACAATAATACAAAGGGGTAGGGAAAATAGTAACAATATTATGGCTCAACCATTTCTCC
ATGAATTCAAGAAACAAGCTTCTTTCTACCTAAAGGAGAAGATCAAAACAGCTAGATTGGCTTTGACTGATGTTACACCAACTCAGATAT
TGACAGAAGAAGCTACAAATGGAAATCCAGGTGCACCTGACACAAAAACATTAAAGATGATTTCCAAGGCAGCTTTTGAAGTTGATGATT
ATTGGAGAATTGTTGGGATCCTACATAAAAAATTGTCAAGTTTTGATAAAAAGAATTGGAGGGTTTCATATAAGGCTGTGATAGTGTTGG
AACACTTGTTGACTCATGGACCTGAAAGTGTTGCTGAGGAATTTCAAAGTGATAAAGGTGTTATTAGGGAAATGGGAAGCTTTCAACTCA
TTGATGAGAAAGGATTCAACTGGGGGCTAAATGTTAGGAAGAAATCTGAGAGGATATTGAAGCTGTTAGAAGATGGACAACTTCTCAAAG
AAGAGAGGAACAAATCAAGGAAGATATCAAGAGGGATTGAAGGTTTTGGGAGCTTTAACATTAGGAGGACTACTAGTTCAGAGGAAGAAT
CAGCAATTAAACCTTATGGAAGGTCTAATTCACAGTTTAATCATCATGAAAATGATGATGATGATGATGATGAACTGCAAGTTAGTGAGA
AACTGGATGATGAGTACTTAGTAAAAGAAAACATAGCACCAAGTGATGAAATGCACAAATGGAACTTCAAAGGAGAATCAAAAGCACTTT
TGGATGAACAGAAAGAAGAACCAAGGATGGTATTTTCATCAGAAGAGGATCATCCTTTCAGAGAAACAGATCGATTAACGTCAGTCTCAC
TGCTTTCTTCTGGAGATCAAGTCCTCCAAGCATGTCAATAGGAGATCAAGTCCTCCAAGCATGTCAATAGGACGTGTAGCAGCGTATGTA
TGTTGAATAGTTGTTTTATGCGTTCATCTATCTCTCAGAACAGTTGTAGCGTTCTGCCTAAAGATATATGTATAAAGCTAAGAAACACTT
CCCTTACAGACTTAATACCACTACTAGCTGGTTTGAGCTTCTGTTATAACCTTTACCTACAGGGTGAAGCAATGCAGAAATGCAACTATA
CTTCCATTTCAGGTTCATGGAATAATTGTTGCTCTCTTGAAAGAGCATAATACCCAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTCC
TGGTGTCGCCTGAGGCTATAGATTTTCTTGACAAGCTTCTCCGTTATGATCATCAGGATAGACCTACTGCAAAAGAAGCAATGGCCCATC
CTTATTTCTTGCAAGTGAGGGCTGCAGAGAATAGCAGGATGAGGACGCAATAGATGTTACTTTGGGAAAGAGGGAGCTTATGGTGTAATG
TTAACAAATATTGTCATCTTCATCTATTTGAGATTAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	3
Solanum lycopersicum	LeMiToLf01	leaf	30679	1
Solanum lycopersicum	Sl_RootSSH01	root	123	2
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	5
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1
Solanum lycopersicum	cTOS	suspension cultures	8026	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (21)

Alignment image suppressed for unigene with 21 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U313851	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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