Sol Genomics Network

Unigene SGN-U584707

Unigene Basic Information

Unigene ID:	SGN-U584707
Unigene Build:	Tomato 200607 #2
Date:	2009-03-25
Organism:	S.lycopersicum S.habrochaites S.pennellii S.pimpinellifolium S.peruvianum S.cheesmaniae S.lycopersicoides
Alternative ID:	none
mRNA sequence:	Length: 1567 bp

>SGN-U584707 Tomato 200607 #2 (35 members)
AGTAAGGGAATAAGTGCCTGGGGCCTGGGGCCTGGAGCATGTGTTTCATGCTGTTTATGCTTATTCTATTTGAATGGAAAGACTGTTTAT
GTGGATCCTAATCCTATCATCATATTCCTCTTGTTTTTCACTCATATAAGTTTGGTCCGTGACCAAGGGCAATCAACGAATTAGGGTTTG
TGTACACACAACATTCGGTAACAATGTCTGTTGGGAGTGGAGGAGACAAAACACTGGAGGCAATCTGTTATAGGCGCGGCTCACTTCAGT
TACTTGATCAACGAAAACTCCCCCTAGAGACTCTTCATCTGGATATCCACGATACAAACGATGCCTGGGATGCAATTAAGGAAATGGTTG
TCCGTGGGGCACCTGCAATTGCTATAGCTGCTGCACTGTCTTTGGCAGTAGAAGTTTCAAATTTAGCTTCTTTTGATGGGACTTCTCATG
ATGCATCAGTTTTCCTTAGTAAAAAATTGGATTTTCTTGTTTCAAGTCGTCCGACAGCTGTTAATCTTTCAGATTCTGCAGTAAAGCTTA
AAGAAGTTATAAGCAAGGCTGCTGCCATAGCCAAAGAAGCCAATTCAGTGTTTCAGGCTTACATTGAAGCTGCTGAAGTTATGCTGGAGG
ATGATGTTACTTCCAATAAGGCAATTGGTTCATATGGAGCTAGTTTTATTAAGAATTACCTGACAGACTCTAAGAATATAACAATTTTGA
CCCATTGCAACACCGGAAGTCTTGCCACAGCTGGATATGGAACTGCTCTTGGTGTTATCCGGGCACTTTATGCTGACGGAGCTTTAGAAA
GGGCATACTGCACAGAAACCCGTCCATTCAATCAGGGATCCAGATTGACTGCATTTGAATTGGTTCATGAGAACATCCCAGCCACCCTTA
TAGCTGATTCAGCTGCAGCTGCATTAATGAATGCTGGTCGTGTGAAAGCTGTCATTGTTGGAGCTGATCGTATAGCTGCAAATGGTGATA
CTGCCAATAAGATTGGAACTTACAACCTTGCTGTTTCTGCCATGCATCATGGTATACCATTTTACGTTGCAGCGCCTTTGACTTCTGTTG
ATCTATCTCTTTCTTCTGGACAAGAAATTGTGATAGAAGAAAGATCTCCAAAGGAACTGTTACATACACGAGGAGGACTTGGTGAACAAG
TTGCTGCCTCTGGTATTTTGGTTTGGAACCCTGCATTTGATGTCACCCAAGCTAAGTTGATTAGTGGAATCATCACTGAGAAGGGTGTCA
TCACGAAGAATGGGACAGACACTTTTGATATTGCTGGGTTTGTGCGCAAGACAGCAGGAAATTTGTGATGCTGGTTTTGTTAAATGTTTG
TTTAGTTGATATTTCTTGAGCTTTGCTAAACCCCTCCATCTTAGAGTGAGTAAAAAGTACTGACAAGGCAACATCTATTTCACTCCAATA
ATGTTAATCTATTGTGGTCCTATATGAACATGGAAAATTGTTTTGCTATGGGTAAGTAACAGTAATATGCCATGTCCCCATTGGCATCCG
TATTTTGTCAATAAAAATGTTTGTCAATTTAAATATG

[Blast] [AA Translation]

Associated Loci (1)

Locus symbol	Locus name	Gene activity
Solyc08g022210	Solyc08g022210

Genomic locations (0)

None

Library representation (16)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	FA	Fruit Mixture of Immature green, mature green, breaker, turning, and red ripe stages	13933	2
Solanum lycopersicum	LE15	Fruit 15 days post anthesis	269	1
Solanum lycopersicum	LeMiToFr02	fruit	18697	3
Solanum lycopersicum	LeMiToLf01	leaf	30679	10
Solanum lycopersicum	LeTrich01	Isolated leaf trichomes Apical internodes of 5-week old plants.	7299	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	1
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	3
Solanum lycopersicum	cLEY	root pre-anthesis/pre-fruit loading	3259	1
Solanum lycopersicum	cLEZ	root germinating seedlings	2373	2
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	1
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (35)

Alignment image suppressed for unigene with 35 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 0 | blast: 3 | go: 0 )

Protein prediction analysis (2)

Gene Family (0)

None

Preceding Unigenes (1)

Unigene	Build
SGN-U316616	Tomato 200607 #1

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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