Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U571928, SGN-U596653, and SGN-U596655 in the current build, Tomato 200607 #2

Unigene SGN-U213226

Unigene Basic Information

Unigene ID:	SGN-U213226
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	213226
mRNA sequence:	Length: 1425 bp

>SGN-U213226 Lycopersicon Combined #3 (64 members)
TTTTTTTCCTCTATTCTCTTTCTCTCTTTACTTTTTCTTCTTTGTGTACCAAAAAGAAAATAAAAATAAAAATGAACAGAGAGCATTGAA
CAAACACTCTATCAAAAAGCCATAGCTATGGAGTTTCAGGACCACTTTTCTCAAGAAATGGTTCTTCATCAACAGCAGCAGCAGCAGCAG
CAGCAGCAAAACGCGGTATTGCGTTCCATGCTACCTGAATCTCCTCATCACGACGCTCGAAAATCACCTCCGACTTGGCTCAATACTTCT
CTCCTTCGTCAACAACACAGTCAGTTTGGTAACGCATCCTCACCTTCCTCGGCTGCAGCTGCAGCTGCCGTAGCCGGAGGGAATAATTTC
CTTCATCTCCAGACATCTAACTCCGACTCGTCAAACTCTAACCAGTGGCTCTCACCTACTGCGGCGGCTGGAGGTGGAGGTAACGGCGGT
GGAGGTGGGCATAATGATGAGTTATCAGAGTCGATGAATTTTGCGAAGAAGATGAGTCAACAGCATAGTGGAGGAGGAGAAGAAAACAAT
AATAATAATAATAATAATAATAATAATAATAATAATGAAGAGGAGAACTCATGGGAGAGAGAGAAATGTAAAGCGGATATATTGAATCAT
CCTTTATACGATCAGCTACTGTCGGCACACGTTTCATGCCTGAGAATTGCGACGCCGGTGGATCAATTACCGAGGATTGACGCTCAGCTA
GCTCAATCGCAAAACGTGGTAGCCAAATACTCTGTACTTGGACAAGGTCAACCGCCTCTAGATGATAAAGACCTCGATCAATTTATGACA
CATTATGTTCTGTTGCTCTCTTCCTTTAAAGAACAACTGCAACAACATGTCCGCGTCCATGCAATGGAAGCTGTCATGGCTTGCTGGGAG
CTAGAACAATCTCTACAAAGCTTAACAGGGGTAGCACCAGGTGAAGGTACAGGAGCAACCATGTCTGATGATGATGATGACCAGGCTGAT
AGTGACACAAACTTTTTGGATGGAGGTTTTGATGGACCAGATAGCATGGGATTTGGTCCTCTTGTACCTACTGAAAGTGAAAGGTCCCTG
ATGGAGCGTGTTAGGCAAGAACTCAAGCATGAACTCAAACAGGGTTATAAGGAAAAAATTGTTGACATTAGAGAGGAAATTTTACGCAAA
AGAAGAGCAGGAAAACTGCCTGGTGATACTACATCTGTGTTGAAAGCTTGGTGGCAATCACATTCTAAGTGGCCTTATCCAACTGAGGAA
GACAAAGCACGATTAGTGCAAGAAACAGGTTTACAACTGAAGCAGATAAACAATTGGTTTATTAACCAAAGGAAAAGGAACTGGCACAGC
AATCCATCAACGTCTTCTTCTCAGAAAAGCAAACGCAAGAGTGCAGGTGAAATCAGCAGTAAAAAAAGACATGAT

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (19)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	1
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	4
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	6
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	15
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	6
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	2
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	3
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	4
Solanum lycopersicum	cLER	leaf 4 weeks	5127	1
Solanum lycopersicum	cLES	leaf 4 weeks	5243	1
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	4
Solanum lycopersicum	cLEX	root fruit-set stage/post-fruit loading	3142	1
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	2
Solanum lycopersicum	cTOC	developing flower buds and flowers 8mm to pre-anthesis flower buds from full grown plants	5759	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	1
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	4
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (64)

Alignment image suppressed for unigene with 64 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (4)

Annotations (manual: 3 | blast: 2 | go: 5 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	116	Homeobox	112
2	22285	Homeobox KNOX2 ELK KNOX1	38
5	56862	Homeobox KNOX2 ELK KNOX1	21

Preceding Unigenes (1)

Unigene	Build
SGN-U143760	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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