Sol Genomics Network

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This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been split into SGN-U567267 and SGN-U588415 in the current build, Tomato 200607 #2

Unigene SGN-U214750

Unigene Basic Information

Unigene ID:	SGN-U214750
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	214750
mRNA sequence:	Length: 2505 bp

>SGN-U214750 Lycopersicon Combined #3 (29 members)
CTCGTGCCGGTTAAATCCTAATAACGGAGAAGTATAATATACTACTGGATTCAACTGGTTATATTCTAAAAGGCAAAGAAACGATTCTTT
TTTGTTTTTGAAAAAATGGAATCATCGGCAGAGCGACGCCTGAAAGCTATTCAAAGCCATCTTGTTCCGGCCACCGACGACGTGTCTCGG
TCATTGATCCGTTCAAACCCAACTGCCGGCGAATTTTTACTAGGTCAGGGGTTCAGCGTAGTTCTTCCTGAGAAATTGCAGACAGGAAAA
TGGAATGTATACAGATCTGCACGATCTCCTCTTAAGCTTGTTACTAGATTTCCCGATCATCCTGAAATTGGGACATTGCACGATAACTTT
GAACATGCGATTCAAACCTTTCAGGATTACAAATATTTGGGTTCACGCATTCGGGTAGATGGAACTGTTGGAGATTACAAATGGATGACA
TATGGAGAGGCAGGGACTGCTCGGACTGCAATTGGTTCTGGACTTCACTATTATGGATTACAACCGGGTGCTCGTGTGGGACTTTACTTC
ATAAATAGGCCTGAGTGGATGATTGTAGACCATGCCTGCTCAGCATATTCATATACTTCAATCCCTCTATATGACACTCTTGGTCCTGAC
GCTGTTAAATATATTGTTAATCATGCTGATGTACAAGCCATTTTTTGTGTGCCAACTACCTTGAACACTTTGTTGACCTTTTTATCAGAG
ATTCCATCTGTACGTTTGATTGTGGTAGTGGGTGGGATAGATGAACATCTCCCATCTCTTCCATCTACAACGGGAATGAAGCTCTTATCA
TATACAAGGCTTCTGAGTCAGGGCCGCAGCAGTATGCAACCCTTTTGCCCTCCCAGGCCTGAAGATATTGCTACCATATGCTATACAAGT
GGTACTACGGGGACACCAAAGGGTGTCGTATTATCCCATGCAAACCTGATAGCAAGTGTTGCAGGCATGACCCTTGCAATCAAGTTTTAT
CCATCTGACATATACATATCCTATCTTCCCCTGGCACACATCTATGAACGTGCCAACCAAATTACATCGGTATATTCTGGTGTTGCGGTT
GGATTCTACCAGGGGGACAATCTGAAATTGATGGATGATTTGGTGACACTTAGACCTACAATATTTAGCAGTGTTCCTCGTCTCTTCAAC
AGGATATATGCTGGGATCACAAATGCCGTACAAACTTCTGGTGTACTGAAGCAGAGACTATTTAATGCTGCCTACAACTCCAAGAAGCAA
GCTGTGATGAACGGTAGAAAGCCATCACCAATGTGGGATAGGTTGGTGTTCAACAAAATAAAGGACAAACTGGGCGGACGAGTTCGTCTT
ATGACCTCAGGTGCCTCACCATTGTCCCCTGATGTGTTGGAGTTCTTGAGAGTATGTTTTGGCTGTCAAGTAATGGAAGGGTATGGCATG
ACTGAGACTTCATGTGTCATAAGCTCAATGGACGAGACTGATAACTTAATTGGTCATGTTGGTTCTCCAAATACAGCATGTGAGATAAAG
CTTGTGGATGTCCCCGAAATGAGTTACACATCAGAGGATCAGCCTCATCCTCGTGGAGAGATTTGTGTTAGAGGTCCTATTGTTTTTCAA
GGCTATTACAAAGATGAAGTGCAGACGAAGGAGGTAGTTGATGATGACGGTTGGCTGCATACTGGTGATATTGGATTATGGTTACCTGGA
GGCCGCTTGAAGATTATTGACAGGAAGAAGAATATCTTCAAGTTGGCACAGGGTGAATACATAGCTCCTGAGAAAATTGAGAATGTTTAT
GCTAAATGCAAATTTATTGCACAATGCTTCGTCTATGGTGATAGCTTTAATTCCTCTTTAGTAGCAATAGTTTGTGTAGAGCCAGATGTC
TTGAAGGAATGGGCATCATCTGAGGGAATCAAGTATGAAGATTTGGGACAACTATGCAATGATCCAAGAGCAAGGGCTGCTGTTCTTGCT
GAGATGGATGCAGTTGGAAGGGAAGCTCAGTTGAGAGGTTTCGAATTTGCAAAAGCTGTAACATTGGTTGTTGAGCCTTTCACAATCGAA
AATGGCCTTCTCACACCCACGTTCAAGGTCAAGAGGCCTCAGGCGAAGGCTTATTTCGCCAAAGCAATATCTGACATGTATAATGAGCTC
TCTACATCAGATCCAGTATCCCAGAAATCACTATGACCAAGTGCAGTCGAGAAAGCTTCAGCTGTTCACCCACACACTTTCCCTTCTTTA
AAATAAATACCAATCAAAATGATTATTGTAGAATAGTAAGCTCACAGAGGATTTTTTAAATCTCGAGTTTATAGATTTCTTGTTGTAGTA
TGTACAATGTTCAGATAATTTAAATTCAACGAAATCTTTTCTGAGATAAATAATTTTAACCTCGACAGCTTATATCCGGATTTTGATGGC
AAATTTGTTTATAAAGCATGTAATTGGCCAGATACATTGAATGGAATTTCTATAATTTAACTCCTAAAAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (11)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEC	combined undifferentiated and shooting callus 7-10 days post germination	14114	3
Solanum lycopersicum	cLED	ovary 5 days pre-anthesis to 5 days post-anthesis	9878	2
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	10
Solanum lycopersicum	cLEI	whole seedlings germinating seed	3927	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	2
Solanum lycopersicum	cLEM	fruit immature green fruit	4240	2
Solanum lycopersicum	cLEN	fruit pericarp red ripe to over-ripe	3979	5
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	1
Solanum lycopersicum	cLEW	mixed roots grown under different nutrient and mineral difficiencies 4-8 weeks	3175	1
Solanum lycopersicum	cTOE	Crown gall crown galls from full-grown plants (4-8 wks old)	5204	1

mRNA member sequences (29)

Alignment image suppressed for unigene with 29 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 1 | blast: 2 | go: 2 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	51	AMP-bind	230
2	22134	AMP-bind	57
5	56529	AMP-bind	33

Preceding Unigenes (1)

Unigene	Build
SGN-U145087	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

Attribute	Value
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