Sol Genomics Network

This unigene is from an out-of-date build, Lycopersicon Combined #3
It has been superseded by SGN-U577274 in the current build, Tomato 200607 #2

Unigene SGN-U225514

Unigene Basic Information

Unigene ID:	SGN-U225514
Unigene Build:	Lycopersicon Combined #3
Date:	2004-06-30
Organism:	S.lycopersicum S.habrochaites S.pennellii
Alternative ID:	225514
mRNA sequence:	Length: 1509 bp

>SGN-U225514 Lycopersicon Combined #3 (32 members)
ACAATAATCAATGGCTTCGGCTGCTCTATCAGTAGCCAATTCTTCTGTCCACGTCAGCAAGAATAAAGGATCATTCTCAGAGTTCACTGG
CCTTCGAACCTCATCTGCCGTTCCATTCGGAGTGGGATGGAAAACTAACGTTGACTTGCTATCTCTTGTTGCTTACCAAACCTCTGTTAT
TAGTGGAGCTGGAAAGAATAATAATAATAATAGTAGAGTAGTGGAGGCAAAATTGAAGGTAGCCATCAATGGATTTGGAAGAATTGGAAG
GAATTTCTTGAGGTGTTGGCATGGTAGAAAGGACTCTCCACTTGATGTCATTGCCATCAATGACTCTGGCGGTGTCAAGCAAGCCTCTCA
CCTCCTCAAGTATGACTCTACCCTCGGCATCTTCGATGCTGATGTTAAGCCTGTTGGTACTGATGGCATCTCTGTTGATGGAAAGATCAT
CAAAGTCGTTTCCGATCGTAACCCCATCAATCTCCCCTGGAAGGATCTTGGTGTTGACTTGGTCATTGAAGGTACCGGAGTTTTTGTCGA
TCGAGAGGGTGCTGGCAAGCATATCCAAGCTGGAGCTAAGAAAGTCCTCATCACTGCCCCCGGAAAGGGTGATATTCCTACCTATGTCGT
TGGTGTCAATGCAGACCTTTACAGCCCTGATGAGTCCATTATCAGCAATGCTTCTTGCACCACAAACTGTCTTGCTCCTTTTGTCAAAGT
CCTTGACCAAAAATTCGGCATAATCAAAGGGACCATGACAACAACACACTCCTACACTGGTGACCAAAGGCTGCTTGATGCAAGCCACAG
GGACCTTAGACGTGCAAGAGCTGCAGCTCTCAACATTGTGCCAACTTCAACGGGTGCAGCTAAAGCTGTGGCTCTTGTCCTTCCCAGCCT
CAAGGGTAAACTCAACGGCATTGCCCTGCGTGTCCCCACTCCCAATGTATCGGTCGTGGACCTTGTCGTTCAAGTATCAAAGAAGACATT
TGCAGAGGAAGTGAATGCTGCATTCAGGGAGTCAGCTGACAACGAGCTTGCTGGCATTCTCTCCGTCTGTGATGAGCCACTTGTTTCAGT
CGACTTTAGGTGCTCTGATGTTTCATCAACTGTGGATGCTTCACTTACCATGGTCATGGGAGATGACATGGTTAAGGTTATTGCTTGGTA
TGACAATGAATGGGGCTATTCACAGAGGGTCGTTGATCTCGCTAACATTGTTGCCAACCAATGGATATGAAAAAGCTCTTATCTATTAAT
TAAATATTAGCTTAACTTTTTTGCCTTATCTGTAGATTATATTGCTCCCCTTTCTGAAAATTGTAACCATCGAGAACCCAGACAGATTTC
TATTCTTAATTTGTATAATATCATCAATTCATTTCAAAAAAAAAAAAAAAAATCTTTAGTATCCAGAGCTTAAATAGTGAGCATCCTTTT
CAGTTTCTTAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAACAAAAAGATACAAAAAGAAGAATAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (14)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum pennellii	cLPT	leaf trichomes 4-8 weeks old	2729	2
Solanum lycopersicum	TUS	Rearrayed collection of L. esculentum cDNA clones	37722	1
Solanum lycopersicum	cLEB	vegetative shoots including meristems and small expanidng leaves 8 weeks	898	1
Solanum lycopersicum	cLEF	fruit pericarp mature green	5317	1
Solanum lycopersicum	cLEG	fruit pericarp breaker fruit	15207	1
Solanum lycopersicum	cLEL	developing flower buds and flowers anthesis-stage flowers from full grown plants, 4-8 weeks old	11276	4
Solanum lycopersicum	cLER	leaf 4 weeks	5127	3
Solanum lycopersicum	cLES	leaf 4 weeks	5243	4
Solanum lycopersicum	cLET	leaf 4-6 weeks	9135	4
Solanum lycopersicum	cTOA	developing flower buds and flowers 0-3mm flower buds from full grown plants	6259	1
Solanum lycopersicum	cTOB	developing flower buds and flowers 3-8mm flower buds from full grown plants	5524	3
Solanum lycopersicum	cTOD	flowers anthesis-stage flowers from full grown plants	5642	3
Solanum lycopersicum	cTOF	shoot developing shoots from 4-6wks old plants	9122	3
Solanum habrochaites	cLHT	leaf trichomes 4-8 weeks old	2457	1

mRNA member sequences (32)

Alignment image suppressed for unigene with 32 aligned sequences.
[Show Image]

Markers Information (0)

Expression Data (1)

Annotations (manual: 1 | blast: 2 | go: 5 )

Protein prediction analysis (1)

Gene Family (3)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	193	GAP_dhdrogenase GAPDH-I E4PD_g-proteo	76
2	22084	GAP_dhdrogenase GAPDH-I E4PD_g-proteo	74
5	56507	GAP_dhdrogenase GAPDH-I E4PD_g-proteo	35

Preceding Unigenes (1)

Unigene	Build
SGN-U143207	Lycopersicon Combined #2

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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