Sol Genomics Network

Unigene SGN-U269582

Unigene Basic Information

Unigene ID:	SGN-U269582
Unigene Build:	Solanum tuberosum #4
Date:	2005-05-04
Organism:	S.tuberosum
Alternative ID:	269582
mRNA sequence:	Length: 1528 bp

>SGN-U269582 Solanum tuberosum #4 (14 members)
CCTCGTGCCGAATCGGCTCTAGGCTTTCCTCAAGATCATTTAGTTGCAGCTATGGCTTCTCATGCAGCTTTGGCTTCTTCAAGAATTCCT
AAAAGCACAAGGCTTCCTTCCAATAAGAACTCCTTCTTATTCCCCACACAATGTTTATCCAAGAAATTTGAAGTAGCTGAATTTTCTGGT
CTTAGATCAAGTGGATGTGTGACATTTTCCAACAGAGAGTCTTCTTTCTTTGATGTTGTCTCTGCTCAACTCACTCCAAAGACCACAGGA
TCAGCCCCGGTTAAGGGAGAAACTGTTGCTAAATTGAAGGTTGCTATCAACGGTTTTGGTAGAATTGGTAGGAATTTCCTCCGATGCTGG
CATGGTCGCAAAGATTCACCACTTGATGTTGTGGTTGTCAATGACAGTGGCGGTGTCAAGAACGCATCTCACTTGCTAAAGTATGATTCA
ATGCTGGGAACATTCAAAGCTGATGTCAAAATAGTGGATAATGAAACCATTAGTGTTGATGGAAAGCACATCAAGGTTGTTTCTAGCAGG
GATCCCCTCAAGCTTCCTTGGGCTGAACTTGGCATTGACATTGTTATTGAGGGAACCGGTGTGTTCGTTGATGGTCCAGGTGCTGGGAAG
CATATCCAAGCTGGTGCCAAGAAAGTTATCATCACTGCACCAGCAAAAGGTGCTGACATTCCAACCTATGTTGTTGGAGTGAACGAGCAA
GACTACTCTCATGAGATTGCCAACATCATAAGCAATGCCTCTTGCACCACTAACTGCTTGGCTCCATTTGTGAAAGTCATGGATGAAGAA
CTTGGAATTGTGAAGGGTACAATGACAACAACACACTCTTACACCGGAGATCAGAGGCTTCTGGATGCATCACACCGTGACTTGAGGAGA
GCGAGAGCTGCAGCATTGAACATAGTCCCGACCAGCACTGGTGCAGCAAAGGCTGTGTCTCTAGTGCTACCTCAGCTCAAGGGAAAGCTC
AATGGAATTGCTCTCCGAGTGCCAACACCTAATGTTTCGGTTGTTGACCTTGTTATCAATGTTGAAAAGAAAGGACTTTCAGCTGAAGAT
GTCAATGCAGCTTTCAGAAAGGCAGCTGACGGTCCGTTGAATGGCATATTGGCTGTTTGTGATGAGCCTCTTGTGTCAGTTGACTTCCGA
TGCAGTGATGTTTCCACCACCATCGACTCCTCTTTAACCATGGTTATGGGAGACGACATGGTCAAGATTGTCGCTTGGTATGACAACGAA
TGGGGATACAGCCAACGTGTGGTCGACTTAGCTCATCTGGTAGCAAACAAATGGCCCGGTTCAGCTGCAGAAGGGAGCGGAGACGCCTTA
GAGGACTACTGCAAGACAAACCCTGCAGACAAGGAATGCAAAGTCTACGAATAATCTCTCTGCTTTCTTTTCCTTTTTGAAATTCTGCAT
GGATGATTTTTGAAGCTAAATTGTTTCCCTTGTTCAAAAATTTATAAATGAATGAATGAGAGTGAAAATCACACAGTTTCGAAAAAAA

[Blast] [AA Translation]

Associated Loci (0)

None

Genomic locations (0)

None

Library representation (6)

Organism	Library	Description	Library size (#ESTs)	Ests in this Unigene
Solanum tuberosum	PPC	leaf 6 week old	5062	1
Solanum tuberosum	PPI	leaf 6-week old leaf	5434	1
Solanum tuberosum	STM	mixed tissues	14805	2
Solanum tuberosum	cPRO	roots in vitro grown stem cuttings	10187	2
Solanum tuberosum	cSTB	leaves and petioles 8 weeks old plants	10327	7
Solanum tuberosum	cSTD	dormant tuber one month post harvest	5045	1

mRNA member sequences (14)

To view details for a particular member sequence, click the SGN-E# identifier.

Markers Information (0)

Expression Data (0)

Annotations (manual: 0 | blast: 3 | go: 5 )

Protein prediction analysis (2)

Gene Family (6)

Family Build (I value*)	Family ID	Annotation**	# Members
1.2	193	GAP_dhdrogenase GAPDH-I E4PD_g-proteo	76
2	22084	GAP_dhdrogenase GAPDH-I E4PD_g-proteo	74
5	56507	GAP_dhdrogenase GAPDH-I E4PD_g-proteo	35
1.1	101545	Glyceraldehyde 3-phosphate dehydrogenase - Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity (GO:0004365) - Biological Process: glycolysis (GO:0006096) - Molecular Function: NAD binding (GO:0051287) Glyceraldehyde-3-phosphate dehydrogenase type I - Biological Process: glucose metabolism (GO:0006006) - Molecular Function: glyceraldehyde-3-phosphate dehydrogenase activity (GO:0008943) - Molecular Function: NAD binding (GO:0051287)	78
2	118512	Glyceraldehyde 3-phosphate dehydrogenase - Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity (GO:0004365) - Biological Process: glycolysis (GO:0006096) - Molecular Function: NAD binding (GO:0051287) Glyceraldehyde-3-phosphate dehydrogenase type I - Biological Process: glucose metabolism (GO:0006006) - Molecular Function: glyceraldehyde-3-phosphate dehydrogenase activity (GO:0008943) - Molecular Function: NAD binding (GO:0051287)	71
5	129168	Glyceraldehyde 3-phosphate dehydrogenase - Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity (GO:0004365) - Biological Process: glycolysis (GO:0006096) - Molecular Function: NAD binding (GO:0051287) Glyceraldehyde-3-phosphate dehydrogenase type I - Biological Process: glucose metabolism (GO:0006006) - Molecular Function: glyceraldehyde-3-phosphate dehydrogenase activity (GO:0008943) - Molecular Function: NAD binding (GO:0051287)	34

Preceding Unigenes (1)

Unigene	Build
SGN-U244045	Solanum tuberosum #3

Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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